Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4705 TTGACATCTCGCTTCCCAGTGCATTGTTCTTGTGATTCTGCTTTACTTCGATTTGTTTCTGTTAAAAGTTTGGAGGTTGAGTGTAGTGTTCTTGTGATTCTCCTTTACTTTGATTTGGTGTTAGTTCACTGTGTGAATAGCTTTTTGTTTGGTATCTCTTTCATTATAATCCCATGGCCTTTTAAAGAATTTCTGGAAACTACACTGCGTCATAATATGGGACCATCTAATTCACCACCTCGAAGGTATAATGATCCCAAAgCGGGTGATGACTTGAGTTCAAGGAAACGCAAATGGTCAACAGCTAAAGGATCATCATCTACTTCAAATCAAGCATGGCAAGAATACTTTGTAAGTCAAGATTCGGGGGCAAATGTTAAACGTCGTAAGGTGGTCGAACTATTGAACATGTATAGGGAATTATCTTCCAAACTCTTGCATAAATATGAGGCAGATAAACAACACACGGTCAATGCAAGAAGAAAAGTGTGGATGGAGGTAGCAATGTGTCTTAGGCAACAACACAAATGGATTAACAGTGGCAAACAATTAGGGCCAATCCCAGGAATTGAAGTCGGTGACCAATTTCAGTGCAGGGCTGAATTGAACATTGTTGGTCTTCATTGTCAATATAGGCGTGGTATTGACTTCATGAAGAAGGATGAAGTATTGTTGGCCACAAGCATTGTGGCTACTAATCGCTATGCCAATGTTAAAAGTTCAAGTAATTCACTGACTTACATAGGCCACGGAGGAAATCCACAGGTTAGGAATGTGAAGCCAACCGATCAGAAACTAATAGAAGGAAATCTTGCAATGATGAATAGTATGAAAGCTAAAACCCCTGTAAGAGTTGTTATGAAGGTTAGTAATTCTAAGTCTAACATCAATTACATATATGATGGATTGTACATAGTGGAAAAGATGACCCAAGTGAGAGGTGAATATGGAAAACTTGTCTTTAAATTTTCCTTGACTAGAACTTCGAATCAACCTTATAGTTTTAGCCTAAGGAAGATGATTGATAAACCGAAAAGTTCTGCTGTAGCCAAAAGGGAGGTAGTTTGTTCTAATGACATTTCACGAGGGCTTGAGAAGTTTCCTATTCGTATGGTGACATCTATCCGTGATGATGATTTGAAGCCTACCTCATTTGATTACATAGTCCATAATGTTTATCATGAGAATATGCATCATCCTATGGCCATGCTTAATTGTTGTAATTGCATAGATGGATGCatggaaaacaagaaatgtGCATGTGCTATCAAAAATGGTGGAAGAATGCCTTATGACTATAACAGGAAACTCGTTGCAATAACAAACTCTGTTATATTTGAGTGTGGATCTTCATGCAAATGCTCTACTTCTTGCATCAACAGGGTAACTCAGTTTGGCATTCAATTCCAACTTGAAATCTTCAAAACCGATTTGAAGGGTTGGGGTGTTAGAACACGTTCTTTTATTCCCTCTGGAAGTTTTGTTTGCGAATATGTTGGAGAAGTTTACCTTGATAAGGAAGCCAAGCCACAGTTGGGTGCTGACGATTGTTCATTTAAAATAGGTCACAAGGGATACATTAATGCTACACGACGTGGGAACGTTGCAAGATTTATAAATCATAGTTGTTCTCCTAATCTGTTTGTTAAAGATGTtttatatgatgatgatgacaagAGATTCCCTCATAAAATGCTGTTTGCTGTGAACAACATACCTGCTGGGAGGGAACTGTGTTTTGACTATAATTGCATGAAGGGAAAATCTAATGAACAAGAATTGAGAAGCTTAGCCACAGATCTGAATCCATTGTTCAACGCCATGGCAGCAGGTGGTAATGAGATGCAAACACGACGACGAATATGGGCTTTCCAGGTTCTTCCTCTAGCTTCTAGGTTTCGCACACGTATCCGTCTTCGAACCCTACGAGTAATGGGTATTGTTTTGCCTTTCCGGCATACCTTTTATACAGGCCGGGTCGGGTCTGAAATAGTCATTGGTTCAATGGTTTCAAACAATAATTCAATATCATATTAA 2037 0.3819 LTSRFPVHCSCDSALLRFVSVKSLEVECSVLVILLYFDLVLVHCVNSFLFGISFIIIPWPFKEFLETTLRHNMGPSNSPPRRYNDPKAGDDLSSRKRKWSTAKGSSSTSNQAWQEYFVSQDSGANVKRRKVVELLNMYRELSSKLLHKYEADKQHTVNARRKVWMEVAMCLRQQHKWINSGKQLGPIPGIEVGDQFQCRAELNIVGLHCQYRRGIDFMKKDEVLLATSIVATNRYANVKSSSNSLTYIGHGGNPQVRNVKPTDQKLIEGNLAMMNSMKAKTPVRVVMKVSNSKSNINYIYDGLYIVEKMTQVRGEYGKLVFKFSLTRTSNQPYSFSLRKMIDKPKSSAVAKREVVCSNDISRGLEKFPIRMVTSIRDDDLKPTSFDYIVHNVYHENMHHPMAMLNCCNCIDGCMENKKCACAIKNGGRMPYDYNRKLVAITNSVIFECGSSCKCSTSCINRVTQFGIQFQLEIFKTDLKGWGVRTRSFIPSGSFVCEYVGEVYLDKEAKPQLGADDCSFKIGHKGYINATRRGNVARFINHSCSPNLFVKDVLYDDDDKRFPHKMLFAVNNIPAGRELCFDYNCMKGKSNEQELRSLATDLNPLFNAMAAGGNEMQTRRRIWAFQVLPLASRFRTRIRLRTLRVMGIVLPFRHTFYTGRVGSEIVIGSMVSNNNSISY 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4705 678 MobiDBLite consensus disorder prediction 74 106 - -
Sto8g4705 678 Pfam Pre-SET motif 360 461 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto8g4705 678 SUPERFAMILY SET domain 350 583 IPR046341 -
Sto8g4705 678 SMART set_7 469 589 IPR001214 GO:0005515
Sto8g4705 678 SMART G9a_1 180 331 IPR003105 -
Sto8g4705 678 MobiDBLite consensus disorder prediction 84 98 - -
Sto8g4705 678 ProSiteProfiles YDG domain profile. 185 327 IPR003105 -
Sto8g4705 678 SMART preset_2 357 453 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto8g4705 678 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 108 589 - -
Sto8g4705 678 Pfam SET domain 480 583 IPR001214 GO:0005515
Sto8g4705 678 SUPERFAMILY PUA domain-like 167 344 IPR015947 -
Sto8g4705 678 Gene3D - 183 335 IPR036987 -
Sto8g4705 678 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 108 589 - -
Sto8g4705 678 ProSiteProfiles SET domain profile. 469 583 IPR001214 GO:0005515
Sto8g4705 678 ProSiteProfiles Pre-SET domain profile. 405 466 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto8g4705 678 Pfam SAD/SRA domain 184 331 IPR003105 -
Sto8g4705 678 Gene3D SET domain 336 593 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4705 Sto-Chr8 49426027 49435302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4705 74 582 Su(var)3-9 homologs AT1G73100 33.394 1.54e-79 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto8g4705 SAD_SRA 8.3e-39 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4705 - K11420 gmx:100807574 472.241