Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4685 TTGGGTGAAGAAGGAAACAATGAGAGACATAAGATGAATACTAAAAGTCCAAAAGAAGCAGAAATTCCACTAAGTGGGGAAAACCATTCTTCCGCTACCAGTGATCATcataatcttcttcttcttcatcatcatcatcacaatAATGACAAATCCAaggcctcttcttcttcctccaccgCCGTGGCCTCAGCACAATGGCTGCGGCTGAAGGACCCTAGGATTGTCCGGGTGTCGCGAGCCCTGGGAGGGAAGGACCGGCACAGCAAGGTGTGCACGGTGCGAGGGTTGCGCGACCGGCGGGTCCGGCTCTCGGTGCCTACCGCAATCCAGCTGTACGACCTTCAAGACCGGCTGGGACTGAACCAACCCAGCAAGGTCGTGGATTGGTTGCTGAATGCAGCTAAGCATGAAATTGATGAACTCCCACCTCTTCAAATTCCTCCAGGTTTGTTGAACACTTTGCCTTCATCATCACTTGGTTACAACAATAACCAATGGGAGCATCATCAAGAGgctaataatagtaataataataataatagttcaTCAGGAGGAAATAATAACCATGGATTTGTTTCAAATGCTGATTTATTACTACAAGCTTCTCATCAGATTTTGGTGTGTCCTCCTCATGCTGGAGGGACTTCCTCAGCATCATCACATCCATATTTCCCAAATTCCCAACATTATGCATCCATTCATGACATGGATCAGAGGCAGATGAATCAGTATCATCATCAGATGTTgagctcatcatcatcatcatcctcaaattctcatcatcatcagcaaAATCTACTGTCAAATTGTCTGAGTTCATCTCTTTACCCTGTGAGTATGAGCCAATCTGTGAAGCCATTCAGCTTCAGTATGATGACTCCAAATACTAGACAAAACCAATCCCATAATAAAGACTCAGATTTTCCTTCCAAGTGA 939 0.393 LGEEGNNERHKMNTKSPKEAEIPLSGENHSSATSDHHNLLLLHHHHHNNDKSKASSSSSTAVASAQWLRLKDPRIVRVSRALGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQIPPGLLNTLPSSSLGYNNNQWEHHQEANNSNNNNNSSSGGNNNHGFVSNADLLLQASHQILVCPPHAGGTSSASSHPYFPNSQHYASIHDMDQRQMNQYHHQMLSSSSSSSSNSHHHQQNLLSNCLSSSLYPVSMSQSVKPFSFSMMTPNTRQNQSHNKDSDFPSK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4685 312 MobiDBLite consensus disorder prediction 245 266 - -
Sto8g4685 312 MobiDBLite consensus disorder prediction 170 192 - -
Sto8g4685 312 Pfam TCP family transcription factor 84 243 IPR017887 -
Sto8g4685 312 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 45 173 - -
Sto8g4685 312 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Sto8g4685 312 MobiDBLite consensus disorder prediction 290 312 - -
Sto8g4685 312 MobiDBLite consensus disorder prediction 1 17 - -
Sto8g4685 312 MobiDBLite consensus disorder prediction 1 33 - -
Sto8g4685 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 45 173 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4685 Sto-Chr8 49277184 49278314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4685 67 149 TCP Transcription Factor Family AT3G02150 84.337 1.01e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto8g4685 TCP 8.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4685 - - gmx:100816424 184.111