Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4678 ATGGTGAGCTTCTTATTCCTTTTCCTCCTCTCCACCATCCCCGTCCTCACCTCCTACACTCCCACCGACTTTTTCTCCGTCAACTGCGGCTCCTCCGCCAAATCTCCCGCTTCCGATCACCGGAACTGGACCGGAGATATCGCCTCCAAACTCTTCTCTCCCATTGATGAACCCCACAACACCACCCACCCCTCCTCCGTCGTCGCCACCGCACCCACCTCCCTCGAACTCCCTTACTCCACCGCGCGCCTCTCTCGCTCCCAATTCACCTACTCATTTCCCGTCCTCACCGCCGGCCAGAAATTCCTCCGCCTCTACTTCTTCCCTTCCTCCTACCCCGACGACTTCCACCGCTCCGATTCCCTCTTCTCCGTCAAAGCCGGGCCCCACACCCTTCTTAAGGACTTCAACGCTTCACTCGCCGCCGACGACACCCAACAAACTACACTCTTCCGAGAATACTGCGTCCACGTCCAACCTCGTGACCGAAAACTCAACGTAACCTTCACGCCCAGCAACAGCGCGTCTCACCCAAACGCCTACGCTTTTATAAACGGAATCGAGGTCGTCTCCATGCCCACCTATCTTTATTACACCAACCCACAGGAAACGGAACCGATGAATCTCAACGGCGGAATCTCCCAGATCTCCGTCGAAAACACCACCGCTCTTGAAACATCGTACAGAATCAACGTCGGCGGGAGTCAAATCGCTCCCGACAAAGACACCGGCATGTTCCGGTATTGGGACGAGGATGTCCGGTATTTAGAAAGGGAGTATCCACAAAGCACACCGGCAGGTTTCGGTTTCAAGCCCATCTACAAAAACTTTCCCAATTATACTGCACCGGATGACGTGTACTTAACCGCCAGAACCTACGGGATGACGATGAACGAGATATCGATGTCCGTGTACAACGTGACGTGGCAGTTTAGAGTGGACTCGGAGTTTACTTACATGGTGCGGTTACATTTTTGTGAGTTTGAGCAAGAGATTCAAAATGTTGGGGATAGAGTCTTCCAGATCTTTATTGATGATACTTTGGTTGAGCCTCACGCGGATGTGATCACGTGGAGTCACGCGAATCTGGTTCCTGTCTATAAGGACTACGCTGTGATGAATTTGAAGAAAATGAATCTTTCGATTAAGTTACGACCGCTTCCAAATAGAAGACTAACCAGCTATCGTGATGTGATACTAAATGGTATTGAGATTTTTAAGATGAGTGATGGTAGTGACAATCTCGGAGGTCCCAACCCCGATCCACCACGTCGTTTACCCGATCCCTCGTTGTCGTCAATGAATACATCTAAGAAGAAAACGACGGTGGTTTTCATTGTCGTTGGTGTAGCTTCAGGCTGCTTCGTCGTGATACTGATATCTCTCATCACTTGGCTTATTTTCTGCCGAGTCAGTCCAAGGTGGGGACAGAATGAGAAATCAATAGCTAAAAATGCGTTGTCGTCATCGTTGCCGTCTGATCTGTGTCGTTGCTTTTCAATCGCTGAAATCAGAGCGGCCACTAATAATTTCGATGATGTTCTCATAGTGGGAGTAGGAGGGTTTGGTAACGTGTATAAAGGCTACATTGATAACGGTACGGTTCCTGTGGCGATCAAGCGGCTCAAACCGGGTTCACAACAAGGCGCTCACGAGTTTCAGACCGAGATAGAGATGCTATCACAACTCCGTCACCTTCATTTGGTGTCTCTCATTGGTTACTGCAACGACAACAACGAGATGATCCTCGTGTACGAGTTCATGGCACGTGGGACCCTCCGTGACCACCTTTATAACTATAACAATAACAACTCTGATCATAATAACAAACCAGTACTCTCTTGGAAGCAGAGGTTGGAGATGTGTCTGGGTGCGGCGCGTGGGCTACACTACCTCCACACAGGCGCGAACCACAACATCATCCACCGCGACGTGAAGACTACGAACATCTTGATAGACGAGAAGTGGATAGCGAAGGTTTCGGATTTCGGATTATCCAAAGTGGGGCCCACGGGGATGTCGACGTCTCACGTAAGCACGGTGGTAAAAGGGAGTGTCGGGTATTTGGATCCGGAATACTACAAGCGTCAAAGGTTGACTCAGAAGTCTGACGTGTACTCCTTCGGGGTGGTGCTGCTGGAGGTATTGTGTGGGAGGCCGCCTTTGGTACGTACGGTGGAGAAGCGGAAGGCGAGTTTAGTGGAGTGGGTTCGGAGGAGCCATCGTGAGGGTGTGATTGAGGAGACGATTGATCGGACGGTGATGGAAAGTGTGACGCCAGAGTGTTTGAAAGCGTTCAGCGAGATGGCGTTGAAGTGTTTGGAGGATGATGGGAATGGACGGCCGTGTATGAATGATGTGGTGTGGGGCCTAGAGTTTGCGTTGGAGATACAAGAAAGCACGGAAGAGATCATGAGAGGGTTTGGTGGGGCCTTGATGATTAAAGGAGAAGGTGGGAAGAAggtgaaggaggaggaggaagaaagtaATTATGTGGGATTCACGAGTAGTGATGGAACAGTTGATGAATCAAAGAGTAGCAAGGTGACGATGACTACTTTGAGTAATTCATGGGAGATGATGAAGTCAGAGAAGAATATTAGTACGAGAAATAATGGATCATGggaggatgatgatgaagcGAGTTTGTCATTGGTGAATCCTCACTTAAGCAGAATGCTTCTGGATATAAGTAAACTCCGAACTTCAGGTAcgaccaatcaaaataaaccaGCTGTGGCGTGTCCTTTAGGAGTATCCCAATTATACACAACCTGCCTTGGCCTTAACAATAACGATCCTAATAAGCCATATTGTGACCCCAGAAATAGAGATCCCACTTGCCAATGA 2850 0.4832 MVSFLFLFLLSTIPVLTSYTPTDFFSVNCGSSAKSPASDHRNWTGDIASKLFSPIDEPHNTTHPSSVVATAPTSLELPYSTARLSRSQFTYSFPVLTAGQKFLRLYFFPSSYPDDFHRSDSLFSVKAGPHTLLKDFNASLAADDTQQTTLFREYCVHVQPRDRKLNVTFTPSNSASHPNAYAFINGIEVVSMPTYLYYTNPQETEPMNLNGGISQISVENTTALETSYRINVGGSQIAPDKDTGMFRYWDEDVRYLEREYPQSTPAGFGFKPIYKNFPNYTAPDDVYLTARTYGMTMNEISMSVYNVTWQFRVDSEFTYMVRLHFCEFEQEIQNVGDRVFQIFIDDTLVEPHADVITWSHANLVPVYKDYAVMNLKKMNLSIKLRPLPNRRLTSYRDVILNGIEIFKMSDGSDNLGGPNPDPPRRLPDPSLSSMNTSKKKTTVVFIVVGVASGCFVVILISLITWLIFCRVSPRWGQNEKSIAKNALSSSLPSDLCRCFSIAEIRAATNNFDDVLIVGVGGFGNVYKGYIDNGTVPVAIKRLKPGSQQGAHEFQTEIEMLSQLRHLHLVSLIGYCNDNNEMILVYEFMARGTLRDHLYNYNNNNSDHNNKPVLSWKQRLEMCLGAARGLHYLHTGANHNIIHRDVKTTNILIDEKWIAKVSDFGLSKVGPTGMSTSHVSTVVKGSVGYLDPEYYKRQRLTQKSDVYSFGVVLLEVLCGRPPLVRTVEKRKASLVEWVRRSHREGVIEETIDRTVMESVTPECLKAFSEMALKCLEDDGNGRPCMNDVVWGLEFALEIQESTEEIMRGFGGALMIKGEGGKKVKEEEEESNYVGFTSSDGTVDESKSSKVTMTTLSNSWEMMKSEKNISTRNNGSWEDDDEASLSLVNPHLSRMLLDISKLRTSGTTNQNKPAVACPLGVSQLYTTCLGLNNNDPNKPYCDPRNRDPTCQ 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4678 949 SMART serkin_6 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4678 949 SUPERFAMILY Protein kinase-like (PK-like) 488 793 IPR011009 -
Sto8g4678 949 PANTHER OS07G0166700 PROTEIN 17 845 IPR045272 GO:0004714|GO:0006468
Sto8g4678 949 Pfam Protein tyrosine and serine/threonine kinase 517 788 IPR001245 GO:0004672|GO:0006468
Sto8g4678 949 Gene3D - 222 410 - -
Sto8g4678 949 Gene3D - 24 193 - -
Sto8g4678 949 MobiDBLite consensus disorder prediction 411 435 - -
Sto8g4678 949 Gene3D Transferase(Phosphotransferase) domain 1 588 807 - -
Sto8g4678 949 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4678 949 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
Sto8g4678 949 Pfam Malectin-like domain 27 408 IPR024788 -
Sto8g4678 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Sto8g4678 949 Gene3D Phosphorylase Kinase; domain 1 474 587 - -
Sto8g4678 949 CDD STKc_IRAK 517 788 - -
Sto8g4678 949 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 17 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4678 Sto-Chr8 49220825 49225199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4678 11 852 Receptor kinase-like Gene Family AT3G51550 46.530 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto8g4678 Malectin_like 3e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4678 - - qlo:115972814 822.002