LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g4673	ATGGTGATATTAGGGATTAACAGAAATCGACGCAGTGCTTCTAACCCAGCCACCATCCTCCTCTATTGCCTTTACTTCTTAGTTCTTCAACATCACCTAAGTCTCGTCATCTGCGTTTACTTGTACCAACCCATAGAAGATTATGTAATTTTCTGCGGCACTTTAAATCCTCCTTCAAATACTCCTGATGGTCAGAATCGGACATGGATAGCAGATACTATTCAGTCACCGCTATTTTCCCTCATTGAATCCCCAAAACACAGTCCCTCCCAAACCGCCACTACATCTCGTCTCCGTTCCTCAGCCTCCCAATATCTGTACACATCTGCACGTGTCTCTCACACGGAATTCACATACTCCTTTGCCGTCACCGATGGCCCAAAGTTTGTTCGCCTTCACTTCTACCCATCTTCCTACCTCAACTTTCAACGCTTTGATTCTCTGTTCTCTGTTAAGTCAGGCAACTTCACGCTTCTCAAGGACTTCAACGCTTCCCTTGTTGCTGATTACACCCAAGATCATGAAATTGTCTCAAAAGAATACTGCATCCACGTTGACCCAGGTCAAAGGCTAAACGTGACTTTCACCCCCacaaatagtaataataataattatgcttttatcaactccatcgAGATTGTGTCTATGCCCACCTATCTTTATTTCACTGATCCAACTCAACCCGGGTTGCCTCTGGTGGGTAGAGACTTCAATGATTTCCAAATCGACAACACAAGGGCCATGGAGATGGAATACCGAATTAATGTTGGAGTCAAAGCAATCGGTCCCGAAGGAGACACTGGCATGTTTCGGAGTTGGGAGATCGACGTTGATTTCTTAGAAAAGGTGCGTCCAGCTAGTCTACCATACGACGTCCGAGAACAACTTAACTACGGTAATTTCCGAATTATACTGCGCCGGAGGATGTTTATATTACCGGTCGCTCCTACGGGAAGGGCCAGACTGAAAGATGTTCGTTCAGCAGGCGACAGAGTTTTCCAGATCTTTTTAGCTGAATCAATGGCTGAGGTCTCTGCTGATGTGATCTTGTGGAGTGGAGGTAGAATGGTTCCTTATTATAAGGACTACATAGTGAGGTTCCAGAACGGAAGCTTGGATCGAACAATCAACCTTTCGATTAAGTTGCAACCACACCCCAATCCCAACAGAAGGGCTTACGACGATGTCATCTTGAATGGAATTGAGATTTTCAAGTTAAGCGACGAGAGTAATGGCAATTTGGCCCAACTCAATCCCCCGCCACCTGTATCTCCTCCGCCGCCATCGGCAACAGAATCTACTTCTAAAACCGCCTTGATTGCTATTGTCGTTGCTGTAGCTTCAGGTTTCATTGTGCTGTTTGTTCTTGGGTTTATAATTTTCCGACGAAGATTGATCAGATCACCTCCAAAAGTCAAGTATGGACACTCCACCACGTCCAAATCACTGCCGTCTGATCTGTGTCGATGTTTCTCAATCGCTGAGATAAAAGCAGCCACAAATAATTTCGATGATCTTTTGAAAATTGGCGTTGGAGGGTTTGGCAATGTGTACAAAGGCTACATTGATGACAATACGGTCCCCGTCGCAATCAAACGCCTCAAACCGGGTTCACAACAAGGGGCCCACGAGTTCTTGACCGAGATCGAGATGCTCTCTCAACTCCGCCATCTCCATTTAGTATCCCTCATTGGTTACTGCAACGACGGCAACGAAATGATCCTCGTCTACGAGTTCATGGCGCGTGGGACATTGCGTGACCATCTTTACGATTCCGACAACCAACCACTTTCATGGAAACAAAGACTAGAGACTTGTCTGGGTGCAGCGCGTGGACTACACTACCTTCACACAGGTGCGAAGCACAATATAATTCACCGTGACGTGAAGGCTACCAACATCTTAATAGATGAGAAATGGGTGGCGAAGGTTTCGGATTTCGGATTGTCCAAAGTGGGACCCACGGGGATGTCGAGGTCCCACATAAGCACGGTGGTGAAGGGTAGTATTGGTTATTTGGATCCAGAATACTACAAGCGTCAAAGGCTGACTCAAAAATCTGACGTCTACTCATTCGGTGTGGTGTTGCTAGAAGTATTGTGTGGGAGGCCGCCTTTGCTACGTACTACCACGAGGGAGAAGCGGAAGGGGAGTTTAGTAGAGTGGGTTCGGAGAAGCCATCGTGAGGGTCTGATTCACGAGACGATTGATCCGTTGGTGATAGAAAGTATCACGCCAGAGTGCTTAAAAGCATTCGGCGAGATGGCTTTGAAATGTTTGGCGGATAATGGGGATGAACGACCATCTATGAGTGATGTGGTGTGGGGCCTGGAGTTTGCGTTAGAACTACAAGAGAGATCAGAGGAGGAGACATTGCTTGGTGGGGCTCTCTGTGAAAACACAGCTCTATTGAAGAAGGaaagtaaagaagaagaagaagaagaagacgacgacGAAGAAAGTAAAATGGGATTCACGAGTAGTGAGGTAACAGTGAGTGAATCCAAGAGCAGCAAAATGACCATTTCCAGTAGTGAAGACCAGGCTTTGGTTTCGGGGTTGGTCTTTTCCGAGCTCAGAGATCCAACAGCACGTTGA	2598	0.4546	MVILGINRNRRSASNPATILLYCLYFLVLQHHLSLVICVYLYQPIEDYVIFCGTLNPPSNTPDGQNRTWIADTIQSPLFSLIESPKHSPSQTATTSRLRSSASQYLYTSARVSHTEFTYSFAVTDGPKFVRLHFYPSSYLNFQRFDSLFSVKSGNFTLLKDFNASLVADYTQDHEIVSKEYCIHVDPGQRLNVTFTPTNSNNNNYAFINSIEIVSMPTYLYFTDPTQPGLPLVGRDFNDFQIDNTRAMEMEYRINVGVKAIGPEGDTGMFRSWEIDVDFLEKVRPASLPYDVREQLNYGNFRIILRRRMFILPVAPTGRARLKDVRSAGDRVFQIFLAESMAEVSADVILWSGGRMVPYYKDYIVRFQNGSLDRTINLSIKLQPHPNPNRRAYDDVILNGIEIFKLSDESNGNLAQLNPPPPVSPPPPSATESTSKTALIAIVVAVASGFIVLFVLGFIIFRRRLIRSPPKVKYGHSTTSKSLPSDLCRCFSIAEIKAATNNFDDLLKIGVGGFGNVYKGYIDDNTVPVAIKRLKPGSQQGAHEFLTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYEFMARGTLRDHLYDSDNQPLSWKQRLETCLGAARGLHYLHTGAKHNIIHRDVKATNILIDEKWVAKVSDFGLSKVGPTGMSRSHISTVVKGSIGYLDPEYYKRQRLTQKSDVYSFGVVLLEVLCGRPPLLRTTTREKRKGSLVEWVRRSHREGLIHETIDPLVIESITPECLKAFGEMALKCLADNGDERPSMSDVVWGLEFALELQERSEEETLLGGALCENTALLKKESKEEEEEEDDDEESKMGFTSSEVTVSESKSSKMTISSSEDQALVSGLVFSELRDPTAR	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g4673	865	Gene3D	-	48	217	-	-
	Sto8g4673	865	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	624	636	IPR008271	GO:0004672\|GO:0006468
	Sto8g4673	865	MobiDBLite	consensus disorder prediction	825	845	-	-
	Sto8g4673	865	SMART	serkin_6	503	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g4673	865	PANTHER	OS07G0166700 PROTEIN	31	290	IPR045272	GO:0004714\|GO:0006468
	Sto8g4673	865	PANTHER	OS07G0166700 PROTEIN	326	826	IPR045272	GO:0004714\|GO:0006468
	Sto8g4673	865	ProSitePatterns	Protein kinases ATP-binding region signature.	509	532	IPR017441	GO:0005524
	Sto8g4673	865	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	326	826	-	-
	Sto8g4673	865	PANTHER	RECEPTOR-LIKE PROTEIN KINASE FERONIA	31	290	-	-
	Sto8g4673	865	Gene3D	Transferase(Phosphotransferase) domain 1	580	795	-	-
	Sto8g4673	865	Pfam	Protein tyrosine and serine/threonine kinase	508	774	IPR001245	GO:0004672\|GO:0006468
	Sto8g4673	865	CDD	STKc_IRAK	509	774	-	-
	Sto8g4673	865	MobiDBLite	consensus disorder prediction	805	845	-	-
	Sto8g4673	865	Pfam	Malectin-like domain	52	278	IPR024788	-
	Sto8g4673	865	ProSiteProfiles	Protein kinase domain profile.	503	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g4673	865	SUPERFAMILY	Protein kinase-like (PK-like)	480	779	IPR011009	-
	Sto8g4673	865	Gene3D	Phosphorylase Kinase; domain 1	488	579	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g4673	Sto-Chr8	49159830	49162507	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g4673	42	865	Receptor kinase-like Gene Family	AT3G51550	44.098	0.0	644

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Sto8g4673		PK_Tyr_Ser-Thr	1.5e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g4673	-		-	tcc:18601715	743.036