Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4667 ATGTCTCGTGGGACCCTTCGTGATCATCTTAATAACGCTAATACCCCACCTCTCACATGGAAGCAAAGGCTTCAGATTTGTATTGGAGCAGCAAAGGGACTGCATTATCTTCATACAGCCGCCACTCACACTATTATTCACCGTGATGTGAAGTCCACTAATATACTCTTAGATGAGAAATGGGTGGCTAAGGTATCGGATTTCGGGTTATCTAGAATTGGGCCTATGGGTGTTTCCAAGGCCCATGTTACCACTGTAGTGAAGGGTAGTGTGGGTTATTATGAAGAGGGCATAGTGAGGGAGATTGTGGACCCTGCTTTGAAGGGTAAGATAGTGGCGGAGTGTTTGGGGAAGTTCAGTGAGATTGCTGTGACTTGTTTGGTTGATGATGGAACCAAACGACCATCCATGAGCGATGTCGTTTGGGGGCTAGAGTTTGCGTTGCAATTGCAAGAGAACGGTGAGCAGCATGAGATGATGAACGACAGTAGTGAATGGAAAGAGGTAGAAGGAAGCAAGAGCGTTGAGGATAGTGATGAATACTTGTTCAGTAGTAATAATAATACGAGTGTTGGTTGA 579 0.4525 MSRGTLRDHLNNANTPPLTWKQRLQICIGAAKGLHYLHTAATHTIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPMGVSKAHVTTVVKGSVGYYEEGIVREIVDPALKGKIVAECLGKFSEIAVTCLVDDGTKRPSMSDVVWGLEFALQLQENGEQHEMMNDSSEWKEVEGSKSVEDSDEYLFSSNNNTSVG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4667 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Sto8g4667 192 Pfam Protein tyrosine and serine/threonine kinase 1 73 IPR001245 GO:0004672|GO:0006468
Sto8g4667 192 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4667 192 PANTHER OS07G0166700 PROTEIN 96 170 IPR045272 GO:0004714|GO:0006468
Sto8g4667 192 PANTHER OS07G0166700 PROTEIN 1 93 IPR045272 GO:0004714|GO:0006468
Sto8g4667 192 MobiDBLite consensus disorder prediction 157 192 - -
Sto8g4667 192 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 1 93 - -
Sto8g4667 192 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 96 170 - -
Sto8g4667 192 SUPERFAMILY Protein kinase-like (PK-like) 1 145 IPR011009 -
Sto8g4667 192 MobiDBLite consensus disorder prediction 158 177 - -
Sto8g4667 192 MobiDBLite consensus disorder prediction 178 192 - -
Sto8g4667 192 Gene3D Transferase(Phosphotransferase) domain 1 95 171 - -
Sto8g4667 192 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Sto8g4667 192 SMART tyrkin_6 1 144 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4667 Sto-Chr8 49118283 49118943 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4667 1 157 Receptor kinase-like Gene Family AT3G51550 49.761 6.92e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto8g4667 PK_Tyr_Ser-Thr 4.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4667 - - gmx:100499640 236.884