LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g4665	ATGGCGATGTTGGTGAATAAAAAAGAAGGCAGTGCTAACTCTAATCCAACAACAATCCTCCTCTCTTGCCTCTGTTTGTTAGTTGTTGAACATCAGCTACTTAGTCTCATCATCTGCGTTCACTCCTACCAACCTATAGAAGACTTGGTAATTTTCTGCGGCACCTCAACTCTTCCTTTAAATACTCCTAATGACCAGAATCGAAGATGGCTAGCAGATAATATTGAAGAGTTTGAATTATTTTCGCTCACTGAATCAAGCACACACAACTCCTCTGTAACAGCAACTTTTTCTTATCTTCCAACTTCACTCATCAATACATATTTGTACGCCTCTGCTCGCCTCTCTTACTCCCAATTCACATACTCCTTTCATGTTACTGATGGCCCAAAGATTGTTCGCCTTCACTTCTACCCATCTTCCTACCCCAACTTTCAACGCTTTGATTCTCTGTTCTCTGTTAAGTCAGGCAACTTCACGCTTCTCAAGGACTTCAACGCTTCCCTTGTTGCCGATTACAGCCAAGATGAAATTGTCTCAAAAGAATACTGCATCCACGTTGACCCAGGTCAAAGGCTAAACGTGACTTTCACCCCCacaaatagtaataataataattatgcttttatcaactccatcgAGATTGTGTCTATGCCCACCTATCTTTATTTCACTGATCCAACTCAACACGGCTTGCCTCTGATGATGGGTGCCATAAACTCCAATGATTTTCGCATAGACAACACAAGGGCCATGGAGATGGAATACCGAATTAATGTTGGAGGCAAAGCAATCGGTTCCGAAGGAGACACTGGCATGTTTCGGAGTTGGGACTTCGACGTTGATTTCTTGAATAAGTCGGCGAGTGCATCTAATTCTGATCTACCATTTGATACAAAAAACCCACTTAATTACAGCATAATCTCGGATTATACTGCGCCGGAGGATGTATATAGAACCGCTCGGTCTTACGGGGAGAATCAGAAGTCGATGTTTAACGTGACATGGAATTTCGAGGTGGTGTCGGAGTTTGATTACTTGGTTAGGCTTCATTTTTGCGAGGTTGATCCAGCGGTTAATAAGACAAGCCAGAGAGTGTTTCAGATCTTCATTGCGGATGCATTGGCGGAGAGTCATGCCGATGTGATGAAGTGGACCGAGAGTAGAATGGTTCCTTATTATAGGGACTATGCCGTGAGGTTCAACAACCCAAGTTTGAATCGAAGGATTAATCTCTCGATTAAGCTCCAACCACACCCCAATCCTAACGTCAGAATTTACGACGACATCCTGTTGAATGGAAttgaaattttcaaattaagtgATCAACTTAACAATGGCAATTTGGCCGAACCTAATCCAAAACTACCTCCATCTCCTCCCACTCCCAAGTCCGACTTGTCTAAAATGACCATTATTGCCAAGTCCAAGTTCAACCAATCTTCATTGCCGTCGGATTTGTGTCGTCGCTTCTCAATCGCTGAGATCAAAGCAGCCACAAATAATTTTGATGATGATTTCAAAGTGGGCGTTGGAGGGTTTGGTAATGTGTACAAAGGCTACATTATTAATGATGGCAAGGCCCCCGTTGCCATCAAACGCCTCAAACCGGGTTCACAACAAGGAGCCCACGAGTTCCACACCGAGATTCATATGCTTTCTAAACTCCGCCATCTCCATCTAGTCTCCCTAATTGGTTACTGCAAACAAAGCAACGAGATGATCTTGCGAAGGCTTGAGATTTGTATTGGAGCTGCAAGAGGATTGCATTATCTTCACAGAGAGGAGACTCACACTATCATTCATCGCGACGTTAAGTCATCCAACATATTATTGGATGAGAATTGGGTGGCCAAGATTTCGGATTTCGGATTATGTAGATTGGGACCCACGACCATGTCCAAGAACTACGTCACCACATTGGTGAAGGGAAGCGTTGGGTACCTAGATCCCGAATACTACAAAAGTCAACATTTGACTGACAAGTCTGACGTGTACTCCTTCGGGGTGGTGCTGTTTGAGGTATTGAGTGGAAAGCCACCTTTGATTCGTACGGTGGATAAGGAACAGGTGTTGCTTGCTGATTGGGCAAAGAATTGCGTTGCTAAGGGAACTATTGGTGAGATTGTGGATTCAAATTTGAAGGATGAGATATCATGGGAGTGCTTGAGTAAGTTTATTGAGATTGGTGTAAGTTGTTTGGATGATGATGGGGCTAAACGACCGTCCATGAACGATGTCGTTTGTGGATTGGAGCTTGCACTGCGGTTTCAAGAGACTGATGATCAGCACAAGAGTGGATTTGGAAGGAAAGACGTCATTGAAGAAGAATGA	2334	0.428	MAMLVNKKEGSANSNPTTILLSCLCLLVVEHQLLSLIICVHSYQPIEDLVIFCGTSTLPLNTPNDQNRRWLADNIEEFELFSLTESSTHNSSVTATFSYLPTSLINTYLYASARLSYSQFTYSFHVTDGPKIVRLHFYPSSYPNFQRFDSLFSVKSGNFTLLKDFNASLVADYSQDEIVSKEYCIHVDPGQRLNVTFTPTNSNNNNYAFINSIEIVSMPTYLYFTDPTQHGLPLMMGAINSNDFRIDNTRAMEMEYRINVGGKAIGSEGDTGMFRSWDFDVDFLNKSASASNSDLPFDTKNPLNYSIISDYTAPEDVYRTARSYGENQKSMFNVTWNFEVVSEFDYLVRLHFCEVDPAVNKTSQRVFQIFIADALAESHADVMKWTESRMVPYYRDYAVRFNNPSLNRRINLSIKLQPHPNPNVRIYDDILLNGIEIFKLSDQLNNGNLAEPNPKLPPSPPTPKSDLSKMTIIAKSKFNQSSLPSDLCRRFSIAEIKAATNNFDDDFKVGVGGFGNVYKGYIINDGKAPVAIKRLKPGSQQGAHEFHTEIHMLSKLRHLHLVSLIGYCKQSNEMILRRLEICIGAARGLHYLHREETHTIIHRDVKSSNILLDENWVAKISDFGLCRLGPTTMSKNYVTTLVKGSVGYLDPEYYKSQHLTDKSDVYSFGVVLFEVLSGKPPLIRTVDKEQVLLADWAKNCVAKGTIGEIVDSNLKDEISWECLSKFIEIGVSCLDDDGAKRPSMNDVVCGLELALRFQETDDQHKSGFGRKDVIEEE	777

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g4665	777	SMART	serkin_6	503	754	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g4665	777	PANTHER	OS07G0166700 PROTEIN	577	763	IPR045272	GO:0004714\|GO:0006468
	Sto8g4665	777	PANTHER	OS07G0166700 PROTEIN	41	576	IPR045272	GO:0004714\|GO:0006468
	Sto8g4665	777	ProSitePatterns	Protein kinases ATP-binding region signature.	509	533	IPR017441	GO:0005524
	Sto8g4665	777	Gene3D	Transferase(Phosphotransferase) domain 1	573	766	-	-
	Sto8g4665	777	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	23	-	-
	Sto8g4665	777	Gene3D	-	250	441	-	-
	Sto8g4665	777	Gene3D	-	50	219	-	-
	Sto8g4665	777	ProSiteProfiles	Protein kinase domain profile.	503	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g4665	777	Pfam	Malectin-like domain	110	439	IPR024788	-
	Sto8g4665	777	SUPERFAMILY	Protein kinase-like (PK-like)	488	749	IPR011009	-
	Sto8g4665	777	PANTHER	CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN	577	763	-	-
	Sto8g4665	777	PANTHER	CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN	41	576	-	-
	Sto8g4665	777	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	600	612	IPR008271	GO:0004672\|GO:0006468
	Sto8g4665	777	Gene3D	Phosphorylase Kinase; domain 1	465	572	-	-
	Sto8g4665	777	Pfam	Protein tyrosine and serine/threonine kinase	577	748	IPR001245	GO:0004672\|GO:0006468
	Sto8g4665	777	Pfam	Protein tyrosine and serine/threonine kinase	508	575	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g4665	Sto-Chr8	49106196	49108684	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g4665	28	760	Receptor kinase-like Gene Family	AT5G39000	42.428	0.0	560

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Sto8g4665		Malectin_like	8.8e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g4665	-		-	zju:107407165	667.922