Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4631 ATGGGCATTACATTCAagaataTGTATAATGATCCACCGAAAGATGGAGTAAGTAAAGGGAACGTGCCAGCAATAGCAGCTTCAGTAAAAGGAGACAAAACAGCATTTTACAAATGTGCCTTCAAAGGAGTACAAGACACCTTATTCGACCAGAGTGGTCGCCATTACTTCTATAAATGCTATATTCAAGGTGAAATAGATTTCATTTTTGGAAATGGCCAGTCAATATATGAGAAATGCGTGATAAATTTAGTGGGGGGCCCAGATGGTCCTCAAGGGTTAGGAGGTTACATAACAGCACAAGCGAGAAACTCGGAGAACGACACAAGTGGGTTTGTGTTTAAATATTGCACCATAGAGGGAGTTGGGAAAGTGTTCCTTGGTAGAGCTTATAGAGCCTATTCCAGGGTTATTTTCACCGATTCATATCTCTCACCATCCATTGACCCCCAGGGTTGGTCTGCTTGGGATTACTCTGGCcacgaAGGGAATATTACGTTTGTGGAGGAGGGATGCAGAGGAGCAGGGGCAAATAAGTCAAAGCGTGTGCCTTGGCTGAAGCACATGGGTCCCAATGAGCTCATCAAATTCAAGAGTCAATCGTTTATCGACCGAGACGGATGGATTCCCAAGCAACCAATTACGAATAAGGATATTtga 660 0.4273 MGITFKNMYNDPPKDGVSKGNVPAIAASVKGDKTAFYKCAFKGVQDTLFDQSGRHYFYKCYIQGEIDFIFGNGQSIYEKCVINLVGGPDGPQGLGGYITAQARNSENDTSGFVFKYCTIEGVGKVFLGRAYRAYSRVIFTDSYLSPSIDPQGWSAWDYSGHEGNITFVEEGCRGAGANKSKRVPWLKHMGPNELIKFKSQSFIDRDGWIPKQPITNKDI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4631 219 PANTHER PECTINESTERASE 2 214 - -
Sto8g4631 219 Gene3D - 1 218 IPR012334 -
Sto8g4631 219 Pfam Pectinesterase 23 205 IPR000070 GO:0030599|GO:0042545
Sto8g4631 219 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 214 - -
Sto8g4631 219 SUPERFAMILY Pectin lyase-like 2 212 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4631 Sto-Chr8 48817922 48819102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4631 24 209 Carbohydrate Esterase AT1G05310 43.085 1.56e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4631 - - tcc:18613720 266.929