Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4627 ATGGCTTCTCCAAATTCTTCCCCTTCTGCAGTACCACCTACTTCTGCTGATATTTCACCACCATCTCCTCCGCTTCCTCCTTCAGGTTCCCCTACAAATTCTTCCATCACATCACCACCTCCCACTTCTTCTCAGCCCAATCAAACCTCTGAGACCCCTGCTCCTACATCTCCTTCTGTCCCTGCAACCCCACCACCTTCTTCCCCAGAATCCACATCTCCACCTCCTTCCCCCTCTCTTTCTCCTCCACCTCTATCTACACCGCCTCCAACGTCACCCCCACCCCCGCCTTCCTCACTGGATTCTCCACCACCTACGCCTCCAGcattgccaccaccaccaccacctgcAACTCCAACATCACCCCCACCAGAAGCTGCAACATCACCTCCACCTGCAGCTGCCACTAACCCCCCTCCAACTGAGATTTCACCTCCCCCTCCAAATCTATCTCCACCACCTCCAGTAGAAGTCCCATCTGCCTCTTCACCACCTCCAATTATTTCACCCACTCCAACTAATTCATCAGCAGCAGCAGGGGCCCCAACTGCGCCCCTACCATCTATTCCAACGGAGAAACCAACTGCTAGATCAACTGATGATACTACTATAGTCACAAATTCCCCGCCTACTCATACTGGAGGGTTAAATACAGGAGGATCTGTGGCTATTGGCATTGTAGTTGGTTTTGTTGTCCTCAGCCTTCTTGTTATGGCTGTGTGGTTTGTACAGAAACGAAAGAGGAAGGAAAGAGGACAAAAAGTTGGTTATGCTATGCCTTCTCCATTTGGGTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCTGCTCCCTTGTTTGGTAGTAAGTCTGGTAGTGATTTCATGTATTCTCCATCAGAACCTGGTGGAGTAAGTAAGTCAAGATCATCATTTACATATGAAGAACTTGTCCAAGCGACAAATGGGTTTTCAGCACAGAACCTTTTAGGTGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTCCTAACAGATGGAAGAGAAGTAGCAGTAAAGCAGCTCAAAGTTGGTAGTGGGCAAGGGGAGCGTGAGTTCCAAGCAGAAGTTGAGATTATTAGCCGAGTACATCATCGCCATCTAGTTTCTTTGGTGGGTTACTGTATATCGGACTATCAAAGATTGCTTGTCTATGATTATGTGCCCAACAATACCCTTCATTACCATCTGCATGGTCAAGACGGGCCTGTTTTGGACTGGGCTACCAGAGTCAAGGTTGCCGCCGGTGCAGCTCGCGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATTAAGTCGTCAAACATCCTTCTTGACAACAACTTTGAAGCTCAAGTTTCAGACTTTGGCCTTGCAAAATTAGCCTTGGATACATATACACATGTAACCACGCGTGTTATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAATTGACTGAAAAGTCTGATGTTTATTCCTTTGGGGTTGTGCTTTTGGAGCTAATTACCGGTCGGAAGCCCGTCGATGTCTCTCAGCCAATTGGTGATGAAAGCCTTGTTGAATGGGCAAGACCCTTGTTGATTGAAGCACTTGATAATGAAGACTTTGATATAATTGTGGATCCAAAGCTAGAGAAGAGCtataatagaaatgaaatgttCCGGATGATAGAGGCAGCTGCAGCCTGTGTTCGTCACTCTGCAACAAAGAGGCCACGGATGAGTCAGGTTGTGAGAGCTTTAGATTCCTTAGATGAACTAGAAGATCTGAGTAATGGAATGAAACCTGGGCAAAGTTCAGTCTTTGATTCTGCACAACAATCTGCTCAAATCAGAATGTTCAGGCGTATGGCTTTTGGGAGCCAAGATCACAGTACTAGTTATTTTAATGAGTCTCACTCTCAGAGTAGCTGGAGGAGTAGAGATCAGGAGGATTTAACCACTTCTACCTTCTCCCACAATAGATCTGGACCATGGAATGTCCGAGCAAGGCGGCTTAACCTTGTGCGCGCTGAAGAATCGCCGCACCACCCACGCCGCCGCCACACCCGATCCAACCACCCACACCAATCCTCCTCCGGCGACGACCACCACGGGCACCCAAACGGGGCTGGACACGAGGATCAAGGGCGAGAGAACGATGAGAGCGAGGAGCGCGAGGGTTCCGGCggcgaggaggaggaggaggagcgaGAGGGCTCCGGCGAGGAGGAGGAGGCGGCGGCGGGGGAGAGGGGGAATCGAGAGGGAGACGGAGACGGGGATGGGAGAAGTGAAGAGGGCGAGAAGATTGGGAGGGTTGGGAAGATGGGAGAGAAGGAAAGTGAGAGGGTTGTTTATGGCCGTTGA 2385 0.4813 MASPNSSPSAVPPTSADISPPSPPLPPSGSPTNSSITSPPPTSSQPNQTSETPAPTSPSVPATPPPSSPESTSPPPSPSLSPPPLSTPPPTSPPPPPSSLDSPPPTPPALPPPPPPATPTSPPPEAATSPPPAAATNPPPTEISPPPPNLSPPPPVEVPSASSPPPIISPTPTNSSAAAGAPTAPLPSIPTEKPTARSTDDTTIVTNSPPTHTGGLNTGGSVAIGIVVGFVVLSLLVMAVWFVQKRKRKERGQKVGYAMPSPFGSSQNSGTIFLRPQSPAPLFGSKSGSDFMYSPSEPGGVSKSRSSFTYEELVQATNGFSAQNLLGEGGFGCVFKGFLTDGREVAVKQLKVGSGQGEREFQAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNNTLHYHLHGQDGPVLDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDTYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPIGDESLVEWARPLLIEALDNEDFDIIVDPKLEKSYNRNEMFRMIEAAAACVRHSATKRPRMSQVVRALDSLDELEDLSNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDHSTSYFNESHSQSSWRSRDQEDLTTSTFSHNRSGPWNVRARRLNLVRAEESPHHPRRRHTRSNHPHQSSSGDDHHGHPNGAGHEDQGRENDESEEREGSGGEEEEEEREGSGEEEEAAAGERGNREGDGDGDGRSEEGEKIGRVGKMGEKESERVVYGR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4627 794 MobiDBLite consensus disorder prediction 750 794 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 192 214 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 636 669 - -
Sto8g4627 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Sto8g4627 794 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 56 645 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 731 749 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 700 730 - -
Sto8g4627 794 SMART serkin_6 320 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4627 794 MobiDBLite consensus disorder prediction 682 794 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 636 670 - -
Sto8g4627 794 Pfam Protein tyrosine and serine/threonine kinase 323 593 IPR001245 GO:0004672|GO:0006468
Sto8g4627 794 ProSiteProfiles Protein kinase domain profile. 320 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4627 794 Gene3D Phosphorylase Kinase; domain 1 294 395 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 57 171 - -
Sto8g4627 794 CDD STKc_IRAK 326 596 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 1 214 - -
Sto8g4627 794 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 56 645 - -
Sto8g4627 794 MobiDBLite consensus disorder prediction 35 56 - -
Sto8g4627 794 Gene3D Transferase(Phosphotransferase) domain 1 396 614 - -
Sto8g4627 794 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Sto8g4627 794 MobiDBLite consensus disorder prediction 14 34 - -
Sto8g4627 794 SUPERFAMILY Protein kinase-like (PK-like) 299 593 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4627 Sto-Chr8 48789794 48798037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4627 190 655 Trihelix Transcription Factor Family AT5G38560 70.127 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto8g4627 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4627 - - gmx:100784873 805.823