Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4609 ATGGCCTCTAAAATGGAAATCGATAATTCAACTGCTGCTGCTCCATCATCGCCAAAGAATGTATACAAAGATCCAGATGACGGCCGACAGCGATTTTTGCTTGAATTGGAATTTGTTCAATGTCTTGCTAATCCTACTTACATACACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTGAAGTACCTTCAATATTGGCAACGACCTGAATACATCAAATATATTATGTATCCTCATTGCCTCTTCTTTCTTGAACTTCTTCAGAATGCCAATTTTCGCAATGCAATGGCACATCCTGGTAATAAGGAACTTGCACATAGACAACAGTTTTACTTCTGGAAGAACTACAGGAACAATCGGCTAAAACACATTTTACCTAGGTCACTCCCAGAATCTAGTGCCACACTCGCACCTACTGCAGCCACCGCCTCAACTCCATCTCAGCCACCTGTGCCTGCTATGCCACCAGTACCACCATCTTCGAATGTTCCGGTGACAGTATCATCTGCTCAAGCTCTTTCTCCAATGCCATATGGTATGCCTCCTGGATCTGCTCTTGCAAAAAATGATATGAGGAATCCTTCAGTTGATCGGAGGAAGAGAAAGTAA 627 0.4226 MASKMEIDNSTAAAPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKYIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPESSATLAPTAATASTPSQPPVPAMPPVPPSSNVPVTVSSAQALSPMPYGMPPGSALAKNDMRNPSVDRRKRK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4609 208 MobiDBLite consensus disorder prediction 141 208 - -
Sto8g4609 208 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Sto8g4609 208 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 164 - -
Sto8g4609 208 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Sto8g4609 208 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 164 IPR008831 GO:0003712|GO:0006355|GO:0016592
Sto8g4609 208 MobiDBLite consensus disorder prediction 1 17 - -
Sto8g4609 208 MobiDBLite consensus disorder prediction 154 168 - -
Sto8g4609 208 MobiDBLite consensus disorder prediction 1 23 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Sto8g4609 Med31 4.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4609 K15153 - gmx:100527879 327.791