Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4604 CTGACTCTGGCCTTTCTGGGTGAGAGTGTTGAACTTGAAGAAGCCATTCTTAGCTATTTCTTCCTTTTGGTTTCTATAGCTGTTTCACATATGGGTACTTGCAATTGCAAGTATAAATTTCTTGTTGGGGTTTTATCTATTTTCTGGTTTTTGTGGGTTTCATTAGGAGATTATTCTGGTGATAACATTCTTATAGATTGTGGATCTTCCAATATTACTAAGGTTGGGGATCGAGTATTCCAAGCTGATAATGATAATTCTACTTCTGGGTTACTACTTTCAACCTCAGAAGCTATTTTGGTAAAAGCAGAATCACCaaaccttcttccttcttcatctatTGATGAGTCAAAACTCTACCAAACAGCTCGAATCCTTAAAGGTGTTTCTCAATACACATTCCCTATTAAAACTCAAGGGAGGCACTGGATTCGCTTGCATTTCTTCCCTTTCAGTCATCCTACCTACAATATGAGCACTGCCAGATTCTCTGTTTCTGCTCAAAACACCATCACTTTGCTCAAAGACTTTCAAATGGATGGTTTTGAACTGAAGGAATACTCTTTGAACATCACTGAAACCCAGCTTGTTCTCACTTTCACACCTTCTTCTAATTCATTTGCTTTTCTTAATGCCTTAGAAGTTATCTCAATTCCTGATAAGGTCATTCCTCAGCATGTGAATAGTGTTAACCCACAAGGTGATGATAAGAGTCTCTTCAAGCAGGCTTTGGAGACTATTGCTAGAGTGAACATGGGTAACCAAACAGTGTCTCCCTTAAATGATACCTTAGGGCGTGTTTGGGTCTCTGATGATTCATTTCTTATACACAACAATCTTGTCCATTTTGCATCCAATATTTCAGCAGTCAGTTTCAAAGGAACAAACATATCAGAAGATATTGCACCACTTGAGGTATATGGGACTCTGACTAAGCTGAGCAATGAACAAGATCCCAGAACAAAAGCTAATGTGACATGGCTTTTTGATGTTGATCCTGGTTTTGATTATCTTCTTAGGTTCCACTTCTGTGATGTTGTGAATCTACCACCAAACTCTCTCTTTAACGTTTATGTTAACTCTTGGCTTGTTTCTACTGTCAATCTTGACTCAGTGACACCACATGATGGAGCACCATATTATATGGATGCCATCACAAGAATCAGTGGAAGCAGAAATTTGAATGTGAGTGTTGGTATCCCTAATAATGTAGGTGGTGATAATACTAATAGTCCTTCAGCTTTTCTCAATGGGCTTGAGATCATGAAAATGAGCAACTCTAAGAACAGCCTAGTTTTGGACTTAGAGGGAAACTCCAAGAAAAAGCTTGGGATTATAGTGGGTTCTGTGATTGCTTTGGTTGTGCtggttttgtttgttgttgttatggCTGTTTTTCTGTtatatagaagaagaagaaatggtcTTCAAATCAGTCATGAAAAtggtaatgggaatgggaaGGAGAAGGACCTTTCTTCCATCTTTTCCAGATCGAAAATCGGCTATCGTTTCCCACTCGCCGCGATTCAAAAGGCGACGAGTAACTTCAGTGAAGATTTGGTGATTGGTGTGGGTGGTTTTGGGAAGGTTTACAAGGGAGTTTTCACAGATGGAACAATAGTGGCTGTGAAGAGAGGAGCATCTCAATCACAGCAAGGTCTTGCAGAGTTCAAAACCGAAATCGAGATGCTCTCCCAGTTTCGCCACCGGCATTTGGTATCACTGATTGGATACTGTAATGAACAAGATGAGAGGATCATCATATATGAGTACATGGAAAAGGGCACACTAAAGAACCATCTTTATGGATCATCTGATGTTATCTGCTTGAGTTGGAGGCAGAGGCTTGAAGCATGCATAGGAGCAGCCAAAGGGCTTCACTATCTTCACACTGGCTCAGCAAAGGCTATCATTCACCGCGATGTTAAATCGGCAAACATACTCCTTGATGAGAATTTCATGGCCAAGGTTGCCGATTTTGGTCTCTCAAAGACCGGGCCTGAGATCGATAAGACACACGTCAGCACGGCAGTGAAAGGAAGCTTTGGCTATCTTGATCCAGAATACTTAACAACACAGCAACTAACAGAAAAATCAGATATTTACTCCTTTGGAGTGGTCATGTTTGAAGTCCTATGTGGGAGACCTGTGATAGACCCTTCACTCCCAAGGGAGAAGGTGAATTTGGTTGAATGGGTGATGAAATGTCTCGAGAGAAAACAGTTGGAGGAAATAATCGATCCTCGTCTCGCAGGTCAGCTAGAGTCAGATTCTTCACTGCAGAAGTTTGTAGAGATTGCAGAAAAATGCCTGGCAGAACATGGCACTAATAGGCCTACCATGGGAGATGTGTTGTGGCACTTGGAATTTGTTCTACGACAAGAAGTCGGTGTCGGTCGCGAATCGTCGCGAACTCATCAGATTCATCGCTCAGATACCGGTTTATCTAGCATGGACTACACCATGGGAAGTGTAGGTGACCTCTCTGATGTTTCAATGAGCAAGGTGTTTGCCCAAATGGTGAATGAAGATGTGAGGTAG 2544 0.4017 LTLAFLGESVELEEAILSYFFLLVSIAVSHMGTCNCKYKFLVGVLSIFWFLWVSLGDYSGDNILIDCGSSNITKVGDRVFQADNDNSTSGLLLSTSEAILVKAESPNLLPSSSIDESKLYQTARILKGVSQYTFPIKTQGRHWIRLHFFPFSHPTYNMSTARFSVSAQNTITLLKDFQMDGFELKEYSLNITETQLVLTFTPSSNSFAFLNALEVISIPDKVIPQHVNSVNPQGDDKSLFKQALETIARVNMGNQTVSPLNDTLGRVWVSDDSFLIHNNLVHFASNISAVSFKGTNISEDIAPLEVYGTLTKLSNEQDPRTKANVTWLFDVDPGFDYLLRFHFCDVVNLPPNSLFNVYVNSWLVSTVNLDSVTPHDGAPYYMDAITRISGSRNLNVSVGIPNNVGGDNTNSPSAFLNGLEIMKMSNSKNSLVLDLEGNSKKKLGIIVGSVIALVVLVLFVVVMAVFLLYRRRRNGLQISHENGNGNGKEKDLSSIFSRSKIGYRFPLAAIQKATSNFSEDLVIGVGGFGKVYKGVFTDGTIVAVKRGASQSQQGLAEFKTEIEMLSQFRHRHLVSLIGYCNEQDERIIIYEYMEKGTLKNHLYGSSDVICLSWRQRLEACIGAAKGLHYLHTGSAKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDIYSFGVVMFEVLCGRPVIDPSLPREKVNLVEWVMKCLERKQLEEIIDPRLAGQLESDSSLQKFVEIAEKCLAEHGTNRPTMGDVLWHLEFVLRQEVGVGRESSRTHQIHRSDTGLSSMDYTMGSVGDLSDVSMSKVFAQMVNEDVR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4604 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Sto8g4604 847 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 61 837 - -
Sto8g4604 847 PANTHER OS07G0166700 PROTEIN 61 837 IPR045272 GO:0004714|GO:0006468
Sto8g4604 847 Pfam Protein tyrosine and serine/threonine kinase 522 786 IPR001245 GO:0004672|GO:0006468
Sto8g4604 847 ProSiteProfiles Protein kinase domain profile. 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4604 847 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Sto8g4604 847 Pfam Malectin-like domain 65 424 IPR024788 -
Sto8g4604 847 CDD STKc_IRAK 523 790 - -
Sto8g4604 847 Gene3D - 242 426 - -
Sto8g4604 847 Gene3D - 62 218 - -
Sto8g4604 847 SMART serkin_6 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4604 847 Gene3D Phosphorylase Kinase; domain 1 480 592 - -
Sto8g4604 847 Gene3D Transferase(Phosphotransferase) domain 1 593 812 - -
Sto8g4604 847 SUPERFAMILY Protein kinase-like (PK-like) 493 792 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4604 Sto-Chr8 48566642 48569316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4604 61 847 Receptor kinase-like Gene Family AT2G39360 51.229 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto8g4604 Malectin_like 2.3e-25 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4604 - - lang:109328391 1023.08