Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4601 ATGGAGCTAGACGATCTACCACGCGCCACCACAGCCGAGTTGCCCACGCTCAGGGAACTATTCAAGCTCGAAGGAGACGAATGGAAGGAAGCCAGCAGTGACGGCAGCGAGACGCCGGAGCATCACGCGCTTGACGTGACAAATTCCAGTAGTCTCGAGCCACGCGCGATGCGTTTCGTGCTCTCATTCAGCAATCTCACGTACAGCGTGAGTGTTCGCCGAAAACTGAACTTCTCAATGCTGTTTCCACGGCCAAAAAATAACCGTCTCGGATCGCCGGAGATTAAGACTCTGCTGAATGATATCTCCGGCGAGGCTCGCGACGGCGAGATCCTCGCCGTTATGGGAGCCAGTGGTTCGGGGAAATCCACTCTGATCGACGCGTTGGCCAATCGAATCGCAAGAGGAAGCTTGAAAGGAAGCGTGACATTAAACGGCGAAACCATAGAATCGCGGCTTCTGAAAGCGATTTCGGCGTACGTGATGCAAGACGACCTTCTCTTTCCATTGCTCACAGTGGAAGAGACTCTGACGTTCGCAGCCGAATTCCGATTACCTCGCGCGCTCTCGAGATCCAACAAGAAGATGCGAGTCCAAGCTCTGATAGATCAGCTTGACCTCGGAGACGCCGCCAAGACCGTGATCGGCGACGAAGGCCACCGCGGTGTCTCCGGCGGAGAACGACGGCGTGTGTCGATCGGCATTGACATAATCCACGATCCGATCATACTGTTCCTGGATGAACCGACGTCGGGATTGGATTCGACGAGCGCATTCACGGTGGTGAAGGTGTTGCAGAGAATCGCCAACACGGGAAGCATCGTGGTCATGTCCGTACACCAACCTAGTTCTCGAATACTTGGGCTAATCGACAGAATGATTATATTATCGCGCGGAGAAGCAGCGTTCAGTGGTTCACCGATGCAGCTTTCGATCTTCTTCTCTGAATTTGGTCACCCAATACCAGAAAATGAGAACCATACCGAGTTTGCATTGGACCTCATTCGTGAGCTAGAAGAGGCCTCATCCACCGGTGCCTCGAGCTTGGTGGAATTCAACGAGTCATGGCAGAGCGGAAACAACATCAAGGCAGAACACAATGGATTATCTGTGAAAGAAGCCATCAATGCAAGCATCTCAAGGGGAAAACTAGTTTCAGGCACCACAAACACAAACAAATCAACCCCAAtttcaaaactcccaacattTGCCAACCCAATTTGGATCGAAATCGCAAATCTCACTCACCGCTCCTTCATTAACTCAAGCAGAACGCCGTCGCAATTCGCCGTCCGATTAGCCGCCGTCTTGATCACCGGCTTCATCCTCGCCACCGTCTTCTGGCGACTCGACAACTCCCCCAAGGGAATCCAAGAACGACTCGGCGTCTTCTCATTCGCCGTCTCCACCGCCTTCTACACCACCGCACAAGCCCTCCCTGTCTTCCTCCAAGACCGCCACATCTTCCTCAGAGAAACCGCTCACAACGCCTACCGCCGATTCTCCTACCTCATCTCTCTCATCCTCGTCGCAATCCCCCCGATCCTCATCCTCTCACTCTCCTTCGCAACGACGACGTTTTGGGCGCTAGGTCTCGACGGCGGGAAATCCGGATTCCTCTTCTATTTCCTCATCCTCGTCGCCTCCTTCTGGTCCGCGAGCTCCTTCGTCACATTCCTCTCCGTCCTCATCCCCAACGTCATCCTCGGATACACAATCGTCGTCAAAACCTTAGCCAGCTTCTTCCTCTTCAGCGGCTTCTTCGTGAACCGAAACAGAATCCCTAATTATTGGGTGTGGTTCCATTACCTGTCTCTGGTGAAGTATCCGTACGAAGCCGTGCTGCAGAACGAGTTCGGTGATCCTGTGAAGTGCTTCGTGAGGGGAATTCAGGTGTTCGATTACACGCCGCTCTCTGGAGTGTcgaaggagaagaagatgaagcttCTGGAGAATTTGAGCGAGACGTTGAAGGATTCTGTTTTACATATTGTTGCTACGGAGTGA 2007 0.5207 MELDDLPRATTAELPTLRELFKLEGDEWKEASSDGSETPEHHALDVTNSSSLEPRAMRFVLSFSNLTYSVSVRRKLNFSMLFPRPKNNRLGSPEIKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIARGSLKGSVTLNGETIESRLLKAISAYVMQDDLLFPLLTVEETLTFAAEFRLPRALSRSNKKMRVQALIDQLDLGDAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKVLQRIANTGSIVVMSVHQPSSRILGLIDRMIILSRGEAAFSGSPMQLSIFFSEFGHPIPENENHTEFALDLIRELEEASSTGASSLVEFNESWQSGNNIKAEHNGLSVKEAINASISRGKLVSGTTNTNKSTPISKLPTFANPIWIEIANLTHRSFINSSRTPSQFAVRLAAVLITGFILATVFWRLDNSPKGIQERLGVFSFAVSTAFYTTAQALPVFLQDRHIFLRETAHNAYRRFSYLISLILVAIPPILILSLSFATTTFWALGLDGGKSGFLFYFLILVASFWSASSFVTFLSVLIPNVILGYTIVVKTLASFFLFSGFFVNRNRIPNYWVWFHYLSLVKYPYEAVLQNEFGDPVKCFVRGIQVFDYTPLSGVSKEKKMKLLENLSETLKDSVLHIVATE 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4601 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 641 - -
Sto8g4601 668 MobiDBLite consensus disorder prediction 28 49 - -
Sto8g4601 668 Pfam ABC-2 type transporter 413 619 IPR013525 GO:0016020|GO:0140359
Sto8g4601 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 35 641 - -
Sto8g4601 668 Gene3D - 86 313 IPR027417 -
Sto8g4601 668 SMART AAA_5 108 300 IPR003593 -
Sto8g4601 668 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Sto8g4601 668 Pfam ABC-2 type transporter 280 412 IPR043926 GO:0140359
Sto8g4601 668 CDD ABCG_EPDR 60 305 - -
Sto8g4601 668 SUPERFAMILY Calcium ATPase, transmembrane domain M 349 605 IPR023298 -
Sto8g4601 668 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 323 IPR003439 GO:0005524
Sto8g4601 668 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524
Sto8g4601 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4601 Sto-Chr8 48542740 48546434 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4601 93 310 Calmodulin-binding Proteins AT2G36910 29.018 1.29e-11 66.2