Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4597 ATGGCGAGAAATACGACGCCGTATTACAGTAGTCAAATGGAAATGGAGTTCGGCGATGGTGTACCACCACGCGCCACCGTGTTGCCGACCCTCGGGCAACTCCTCAAGCACGTCGGAGACGTACGGAAGGAAGCGACAGGAGACGGTGGCGACACGCCGGAGCACCGCGCGCTTGACATGACCGACGTCAGTCTGGAGCCTCACTCGCTGCCTTTCGTGCTCTCGTTCAGCAACCTCACATACAGCGTGAAGGTTGGCCGGAAGATGAGCTTCCCGACGCTTTTTTCGCGGCGGAGGGGAGCGGTGACGGAGGACGGAGGAGAGAGTTTGTTCACGAGGACCAAGACTCTGCTTAACGATATCTCCGGCGAGGCTCGCGACGGCGAGATCCTCGCCGTTATGGGAGCTAGTGGTTCAGGAAAGTCCACTCTGATCGATGCGTTGGCCAATCGGATAGCGAAAGGAAGCTTGAAAGGAAGCGTGAAGTTGAACGGCGAGGCTTTAGAATCGCGGCTTCTGAAGGTGATTTCAGCGTACGTGATGCAAGACGACCTCCTCTTCCCAATGCTCACAGTGGAAGAGACTCTAATGTTCGCAGCCGAATTCCGATTACCTCGCACGCTCTCGAGATCCAAAAAGAAGCAGCGAGTACAAGCTCTGATCGATCAGCTCGGCCTGAGAAACGCAGCCAAAACCGTCATCGGCGACGAAGGCCACCGCGGCGTCTCCGGAGGCGAACGACGCCGTGTATCCATCGGCATTGACATAATCCACGACCCTATCATCTTATTCCTCGACGAACCGACGTCGGGGCTGGATTCTACGAGCGCTTTCATGGTGGTGAAGGTCTTGCAGAGAATCGCCCACACCGGAAGCATCGTGGTCATGTCCGTACACCAACCAAGTTCTCGAATCCTCACCCTCCTCGATCAAATGATCTTCTTATCGCGAGGACAGACCGTGTTCAGTGGTTCACCAATGCAGCTTCCACTCTTCTTCTCTGAATTCGGCCATCCAATTCCAGAAAACGAGAATCGAACCGAGTTCGCATTGGATCTGATTCGCGAGCTAGAAGGCTCACCAGGAGGAACAAAAAGCTTAGTGGAATTCAACAAGTCATGGCAGAGCATGAAGAACTCCGGAATATTGAAAACAGAGGTTAATTATATTCCGAGTCAGAGTCATCAGAATCAATTATCTCTAAAAGAAGCCATTAGTGCGAGCATCTCGAGGGGAAAACTAGTACCAGGAGCCACAAACACAAACATCAACACAAGCCCTGCATCTTCTCTGGTTCCAACATTTGCGAATCCATTCTGGATCGAAATGGGGAAACTCTCGGAAAGATCCTTCACGAATTCACGAAGAATGCCAGAGCTATTCGGAATTCGATTCGCGGCAATCTTCGTCACGGGATTCATCCTGGCCACGATGTTCTGGCAGCTCGATAATTCCCCCAAAGGCGTTCAAGAACGACTCGGCTTCTTCGCATTCGCCATGTCCACAACCTTCTACACAACCGCAGACGCACTCCCTGTCTTCCTCCAAGAGCGTTACATCTTCATGAGAGAAACCGCCTACAACGCCTACCGCCGATCCTCCTACCTCATCTCCCACGCGCTCGTTGCCCTCCCCGCGCTCCTCATCCTCTCGCTCACCTTCGCAGCGACGACGTTTTGGGCGGTAGGTCTCGACGGAGGACTCACCGGCTTCGTCTTCTACTTCCTCGTGATCTTCGCCTCCTTCTGGGCAGGGAACTCCTTCGTGACATTCCTCTCGGGCGTGGTCCCTCACGTGATGCTCGGATACACCATAGTCGTCGCAATCCTGGCCTACTTCTTGCTCTTCAGTGGATTCTTCATCAACAGAAACAGAATCCCCGACTACTGGATATGGTTCCACTACTTGTCGTTGGTGAAGTATCCGTACGAAGCGGTTTTGCAGAACGAGTTCGACGATGCGGTGAAGTGCTTCGTGAGAGGAGTTCAGATTTTCGACAGCACGCCGTTGGCGGCGGCGGCGAGAGGGACGAAGGTGAAGCTGTTGGAGAGCATGAGTGGGACGTTGGGGATGAATATAACGGAGACGACGTGCTTGACGACGGGACGGGATATTTTGGAGCAGAATGGGGTAACGGAGTTGAGTAAGTGGAATTGCTTGTGGGTCATCGGAGATCTAAGAGAACTGGGATTCATCAATAGAGCACAAAGGCTTAACCTCTTCCATAAGATTAAAGACAAGAAATATAATCGCcagttttaa 2262 0.527 MARNTTPYYSSQMEMEFGDGVPPRATVLPTLGQLLKHVGDVRKEATGDGGDTPEHRALDMTDVSLEPHSLPFVLSFSNLTYSVKVGRKMSFPTLFSRRRGAVTEDGGESLFTRTKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVKLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSRSKKKQRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAHTGSIVVMSVHQPSSRILTLLDQMIFLSRGQTVFSGSPMQLPLFFSEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMKNSGILKTEVNYIPSQSHQNQLSLKEAISASISRGKLVPGATNTNINTSPASSLVPTFANPFWIEMGKLSERSFTNSRRMPELFGIRFAAIFVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVALPALLILSLTFAATTFWAVGLDGGLTGFVFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRNRIPDYWIWFHYLSLVKYPYEAVLQNEFDDAVKCFVRGVQIFDSTPLAAAARGTKVKLLESMSGTLGMNITETTCLTTGRDILEQNGVTELSKWNCLWVIGDLRELGFINRAQRLNLFHKIKDKKYNRQF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4597 753 Gene3D - 109 331 IPR027417 -
Sto8g4597 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 101 342 IPR003439 GO:0005524
Sto8g4597 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 723 - -
Sto8g4597 753 Pfam ABC transporter 118 270 IPR003439 GO:0005524
Sto8g4597 753 Pfam ABC-2 type transporter 446 651 IPR013525 GO:0016020|GO:0140359
Sto8g4597 753 ProSitePatterns ABC transporters family signature. 242 256 IPR017871 GO:0005524
Sto8g4597 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 329 IPR027417 -
Sto8g4597 753 CDD ABCG_EPDR 73 324 - -
Sto8g4597 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 30 723 - -
Sto8g4597 753 SMART AAA_5 127 319 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4597 Sto-Chr8 48502493 48513056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4597 117 303 Calmodulin-binding Proteins AT2G36910 30.000 1.73e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4597 K05681 - zju:107413578 1105.12