Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4583 ATGGAGAATTTCGATTCTAAGAGCGGTTTCAATTCCTCTTCCAGAACTTTCCACAGCCTCAGGCCTTCCCTTAACCTCCCTCCTCCTCACGCGCCTCTCTCTGCACCACACTACGCGCTCTCTCTCCGTCGCAAATCGCCCTGGCCCGACTCACTCTCCGCCGTCGTCGACTCCGCCTCCGCCCACCGAGTTTCCTACTCCGACTTCATCCATTTCTCACAAAACTTAGCTTCCAATCTCTACTCCCTCATAGGCCTCTCTAAAGGCGATACGGCCTTCATATTATCCCCTAACCTCACCAAGATCCCGATCCTCTACTTCGCCCTACTCTCTCTCGGCGTCGTCGTCTCTCCGGCTAATCCTATCGCCACACGCGCCGAGATTTCTCACCTCTTTGACCTCTCCGCACCGGTCATTGCCTTCGCCGCGTCATCCGCGGCTCACAAGCTCCCCAAAACGCTACGCCTCGGAGTCATCTTCATCGACTCGCCTGAGTTTGACTTGCTGATGACGACGGAGCGCGTCGTCATTCCACGCGCCGAGGTGAGCCAATCCGACGTGGCGGCGATTCTGTACTCGTCGGGGACTACGGGGAAGGTTAAGGGAGTGATACTGACTCACCGGAATCTGATAGCGTCGGCGGCGAGCTACGACGCGACTCGCCGCGAGAGGGAGAGGCCGGCGGTTTTCCTCTACGCGGTGCCGTATTTTCATGTGTACGGGTTCACGTACTGCCTGAGAGCGGTGGCGTTGTCGGAGACGGTGGTGGTGATGGAGAGGTACAGTTTGGGGAAGATGCTGAGGGCGGTGGAGGAGTTCGGAGTGACTCATCTGGCGGTGGTTCCGCCGTTGGTGATGGCGATGACGAAAGGAGATGTAACGGACGGCTACGATTTGAGGTCGTTGGAAGGGATCGTATGCGGGGCGGCTCCTATAGGAAAGGACACCGTCGCCAGTTTCAAATCCAAATTCCCCAGAGTCTTTTTTGTCCAGGGTTACGGGTTAACGGAATCAACAGCTTCGATTTTTCGAACAATCGGAGAAGTGGAGACAAATAAAGCGGGAACAACCGGTAAGCTTGTATCAGAAATAGAGGCAAAAATTGTAGACCCTCTCACTGGTCGAGCCATGTCTCCTGGTGAGCAAGGAGAGCTCTGGATTAGAGGACCCTTAATAATGAAAGGTTATGTTGGTGACGCAGAAGCAACTTCAGGGACTTTGGTAGATGGGTGGCTCAAGACCGGAGACTTGTGTTATATTGACAATGAAGGCTTCCTATATGTTTTAGATAGATTGAAAGAACTCATCAAATACAAGGGATACCAGGTGGCCCCTGCGGAGTTGGAACACTTGCTTCAGTCCCACCCAGAGATAAACGACGCCGCAGTTATTCCTTACCCTGACGAAGAAGCTGGCCAGGTGCCTTTGGCTTTTGTGGTAAGACGACGCCATAGTTCAATTGGCGAAGCTGACATTCTTGATTTTGTTGCTAAACAGGTTGCACCATACAAGAAAATAAGGCGCATAGTATTTGTTGATTCCATACCAAAGAATGCAGCAGGAAAAACATTGAGGaaggaattaaataaatttgtcCTCCAACAATCTTTATCTAAATTATAA 1623 0.5157 MENFDSKSGFNSSSRTFHSLRPSLNLPPPHAPLSAPHYALSLRRKSPWPDSLSAVVDSASAHRVSYSDFIHFSQNLASNLYSLIGLSKGDTAFILSPNLTKIPILYFALLSLGVVVSPANPIATRAEISHLFDLSAPVIAFAASSAAHKLPKTLRLGVIFIDSPEFDLLMTTERVVIPRAEVSQSDVAAILYSSGTTGKVKGVILTHRNLIASAASYDATRRERERPAVFLYAVPYFHVYGFTYCLRAVALSETVVVMERYSLGKMLRAVEEFGVTHLAVVPPLVMAMTKGDVTDGYDLRSLEGIVCGAAPIGKDTVASFKSKFPRVFFVQGYGLTESTASIFRTIGEVETNKAGTTGKLVSEIEAKIVDPLTGRAMSPGEQGELWIRGPLIMKGYVGDAEATSGTLVDGWLKTGDLCYIDNEGFLYVLDRLKELIKYKGYQVAPAELEHLLQSHPEINDAAVIPYPDEEAGQVPLAFVVRRRHSSIGEADILDFVAKQVAPYKKIRRIVFVDSIPKNAAGKTLRKELNKFVLQQSLSKL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4583 540 Pfam AMP-binding enzyme 53 438 IPR000873 -
Sto8g4583 540 Gene3D - 434 536 IPR045851 -
Sto8g4583 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 534 - -
Sto8g4583 540 SUPERFAMILY Acetyl-CoA synthetase-like 48 534 - -
Sto8g4583 540 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 6 534 - -
Sto8g4583 540 Pfam AMP-binding enzyme C-terminal domain 447 522 IPR025110 -
Sto8g4583 540 CDD 4CL 27 528 - -
Sto8g4583 540 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Sto8g4583 540 Gene3D - 27 433 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4583 Sto-Chr8 48401253 48406079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4583 4 540 Monolignol Biosynthesis Gene Families AT5G63380 51.083 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4583 - - qsu:111992511 694.115