Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4550 ATGAACTATTTGCACAACTGCACTCCAGTGATAGTCCATCGTGATTTGAAATCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGGTTATCAAGAATGAAGAATAGCACATACCTTTCTTCCAGATCCACTGCTGGGACTGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTCGGGGTCATATTATGGGAGCTCTCTACGCTGCAGCAACCATGGGGAGGAATGAATGCAATGCAAGTTGTCGGTGCCGTCGGTTTCCAACATCGCCGTCTTGATATTCCAGACGATATGGACCCTACCATTGCCGATATTATCAGGAAATGCTGGCAGACGTGA 390 0.4436 MNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTYLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNAMQVVGAVGFQHRRLDIPDDMDPTIADIIRKCWQT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4550 129 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Sto8g4550 129 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Sto8g4550 129 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 129 - -
Sto8g4550 129 Pfam Protein tyrosine and serine/threonine kinase 1 128 IPR001245 GO:0004672|GO:0006468
Sto8g4550 129 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 129 - -
Sto8g4550 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4550 129 SMART serkin_6 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4550 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 11 23 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4550 Sto-Chr8 48077500 48080287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4550 1 129 MAP Kinase Kinase Kinase AT1G18160 89.147 6.79e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sto8g4550 PK_Tyr_Ser-Thr 7.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4550 - - gmx:100788742 268.855