Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4527 aTGGTAAGCACAAGGTGGAACCCTACGGGTGAGCAGCTAAGAGCTCTGGAGGAGTTGTACAGAAGAGGGACAAGAACACCCTCTGCTGAACAAATTCAACACATCACTGCACAGCTTAGGAGGTTCGGCAAAATTGAAGGCAAGAATGTCTTCTATTGGTTTCAGAACCACAAGGCCAGAGAGAGGCAGAAACGACGTCGTCAAGTGCAACATATGGAAATGGAATCATCACCTCCCAATAATCCCAATCccaatcatcatcatcttcttcatcacaaCAAAGACTCAGAGGTTGGAATATTATGGAAAAAAGAGATTGATAGATGCACAAAGGAAAAGAAGGAAACAAAAGCTTTGTTTGTTGGGAAATGA 372 0.4032 MVSTRWNPTGEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVQHMEMESSPPNNPNPNHHHLLHHNKDSEVGILWKKEIDRCTKEKKETKALFVGK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4527 123 Gene3D - 2 64 - -
Sto8g4527 123 ProSiteProfiles 'Homeobox' domain profile. 1 64 IPR001356 GO:0003677
Sto8g4527 123 SMART HOX_1 1 68 IPR001356 GO:0003677
Sto8g4527 123 MobiDBLite consensus disorder prediction 61 91 - -
Sto8g4527 123 Pfam Homeodomain 4 63 IPR001356 GO:0003677
Sto8g4527 123 SUPERFAMILY Homeodomain-like 4 70 IPR009057 -
Sto8g4527 123 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 97 - -
Sto8g4527 123 CDD homeodomain 4 65 IPR001356 GO:0003677
Sto8g4527 123 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 97 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4527 Sto-Chr8 47947436 47948504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4527 1 70 Wox Gene Family AT3G18010 84.286 7.46e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto8g4527 Homeodomain 5.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4527 - - pvy:116127645 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4527 8 47947436 47948504 Sto8g4527 8 47947436 47948504 ECH