Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4526 ATGATGGCGGAACCACCGGTGGATCCAGCAGATGTTCCTAAGATGGAGGAAATGCTTGGGCTTCTGAGGATTCGCATCAAGCGTGGCGTCAATCTTGCTGTTCGCGATGTTCGTTCCAGCGATCCGTACGTCGTCGTCAAGATGGGCAAGCAGAAATTCAAGACTGCAATTGTTTATAAGGATATTAATCCAGAATGGGAAGAAGACCTTACACTTCCTGTTATAGACCCAACCATCCCAGTCCATATGACTGTGTATGACTATGACACATGGAGCCCAGATGACCCAATGGGAGACGCAGAATTAGATATTTTACCATACATGCAAGCACTGAAGGCAGACTTATCAGATCTCCCAAATGATTCAGTGATCACAAGGGTTCAACCAGGCAGGCAAAACTGTCTCGCAGAGGAAAGCTGCATTGTGTATAATGATGGCAAAATCACTCAAGACGTTGTTCTTAGACTGCGAAATGTTGAATCTGGTGAACTCGAGATTCATCTCAGCTGGATTGATCTTCCTAAGCACTaa 531 0.4539 MMAEPPVDPADVPKMEEMLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQKFKTAIVYKDINPEWEEDLTLPVIDPTIPVHMTVYDYDTWSPDDPMGDAELDILPYMQALKADLSDLPNDSVITRVQPGRQNCLAEESCIVYNDGKITQDVVLRLRNVESGELEIHLSWIDLPKH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4526 176 SMART C2_3c 21 116 IPR000008 -
Sto8g4526 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 10 175 - -
Sto8g4526 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 20 160 IPR035892 -
Sto8g4526 176 Gene3D C2 domain 10 174 IPR035892 -
Sto8g4526 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 10 175 IPR044562 -
Sto8g4526 176 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
Sto8g4526 176 Pfam C2 domain 20 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4526 Sto-Chr8 47936670 47939689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4526 52 174 C2H2 Transcription Factor Family AT1G70790 48.800 1.46e-41 135