Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4521 ATGGATCCCACTCTTCAAGCCGTTCTCGCTGCAGCCGCGAGCTTCCTTGTCGTCACCCTCTTTCTTGCTGCCGTAATCTACGCCTGCAAGGGCAACAAGAAGACCTCCCCGCGTCCACGCCAAACCCATGCTCAATCCCGATCCATCGCCATCCCGGAGCTCTCCTCCATCGCCGTCGACGCCAGCGGGTCATTTGTCCCGCATGTTCAGATCTCGATCGACGAGCTCACCAAGGCCACCAAGAACTTCTCGCCGGAGCTCATCGTCGGCGACGGAAGCTTCGGCCTTGTCTACAAGGGCCGTCTCTCCAACGGCCTTGTCGTGGCCGTCAAGAAGCTCTCGCCGGATGCCTTCCAAGGGTTTCGGGAATTCCAGGCCGAAATGGAAACGCTCGGTAAGCTCCGACACCCGAATATAGTTACAATTCTCGGGTATTGGGCTGGGGGTTCTGAGAGAATATTGGTCTACGAGTTCATTGAGAGAGGGAACCTCGATCAATGGCTGCACGATCACTCTTCGTCGTCGGGATTAGACGACAACGACGACGATGCTTCTATGGTGCGTTTACCGTTGACCTGGGGAGTGAGAGTGAAGATCATTAGGGGTGTGGCTAATGGCCTGCGGTATTTACATGAGCTGGAGAAGCCTATTATTCACAGGGACATAAAGGCTAGTAATGTTTTGTTGGACTCTGAATTCGAGGCCCAAATTGCTGATTTCGGGTTGGCAAGGAGGATTGATAGTTCCCACTCTCACGTGTCCACCCAATTCGCCGGCACCATGGGGTACATGCCGCCGGAGTATAGAGATGGAGTGAATGTGGCTAATGTGAAGGTGGATGTGTACAGTTTTGGTGTTTTGATGTTGGAAACTGCAACAGGCCAGAGGCCTAATTTGGCAGTGAAATTTGATAAGAAAGACATTGGACTTGTGCAATGGGCTAGGAAAATGGTGGAACGAAATTCCCAAATGGAATTGGTTGATTCCAGTATTTCAAGGGAAGGGATAAGTGAAGCTAATGTGGAAGAGTACTTTAGGATTGCCTGTATGTGCACAAGCGAATTACGGAAAGATCGGCCCGTAATGCCACAGGTTGTGGAAATGTTGGACAAAATGCCGCAGTAA 1125 0.5147 MDPTLQAVLAAAASFLVVTLFLAAVIYACKGNKKTSPRPRQTHAQSRSIAIPELSSIAVDASGSFVPHVQISIDELTKATKNFSPELIVGDGSFGLVYKGRLSNGLVVAVKKLSPDAFQGFREFQAEMETLGKLRHPNIVTILGYWAGGSERILVYEFIERGNLDQWLHDHSSSSGLDDNDDDASMVRLPLTWGVRVKIIRGVANGLRYLHELEKPIIHRDIKASNVLLDSEFEAQIADFGLARRIDSSHSHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLETATGQRPNLAVKFDKKDIGLVQWARKMVERNSQMELVDSSISREGISEANVEEYFRIACMCTSELRKDRPVMPQVVEMLDKMPQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4521 374 Pfam Protein tyrosine and serine/threonine kinase 89 369 IPR001245 GO:0004672|GO:0006468
Sto8g4521 374 CDD STKc_IRAK 89 372 - -
Sto8g4521 374 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Sto8g4521 374 SUPERFAMILY Protein kinase-like (PK-like) 66 369 IPR011009 -
Sto8g4521 374 Gene3D Transferase(Phosphotransferase) domain 1 159 374 - -
Sto8g4521 374 ProSiteProfiles Protein kinase domain profile. 83 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4521 374 SMART serkin_6 83 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4521 374 PANTHER OS01G0253100 PROTEIN 1 371 IPR045271 GO:0004714|GO:0006468
Sto8g4521 374 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 371 - -
Sto8g4521 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Sto8g4521 374 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4521 Sto-Chr8 47891507 47892631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4521 67 372 Receptor kinase-like Gene Family AT5G07280 42.857 6.97e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sto8g4521 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4521 - - lang:109335579 464.922