Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4493 ATGCTTCATTTGGCTATAACTTTTGGGTCTAAGGTAATTGAGGATACCGAGCGTTTTGACTATTTTGCTATCCGAAATTTTGGGAATTGGATTCCTGAAGAGATAATGGCATCAGCTTCACCTTCTCCCAATTCTTCCCCTTCTCCTGCTAATaattcaccaccaccacctacaAATTCTTCCACCACATCACCACCTCCCTCTTCCTCTAATACccctcctccttctccttctcctccacAGGCAGTCCCTTCAGCCCCTCCTCCTTCATCACCGTCTCTTTCTCCGCCTCGGCCGCCGGATTCTCCACCAGCATCTCCCCCACCACCGGTTACAACTGCCCCTCCTCCAATTGAAGCTTCACCTCCCACTCCAAATTCATCCCCACCACCTCCAGTGGCTGCTTCTCCTCCTCCCAAAGCATCAGCTGCACCTCCCTCTGAACCCATTTCGCCTGTTTCTCCACCTCCTCCTCCAGTCGAAGTTCCAACACCACCATCCTCTGGTTCTCCTCCTCCGCCTCAGGGAAAGCCGCCGGAAAGTACTCCTTCGCCGCCTTCCCTTACACCACCACCATCTGGTTCTGAGTCTCCTCCTCCATCTACATTGCCATCAACTCCTCCTTCAGTCCCTTCAGCCTCTTCACCTCCTCCAAATTCTTCACCTGCTCCTCCAGCCAATACATCAGCACCTGGGGCTTCCACTGTGCCTCTGCCCTCTATTCCAACTGAGAAACCCACTGCCAAATCTACTAATGATACTGACACATCCACAAATGGCAAATCTTCACAAGGGTTAAGCTCCGGAGAAGTTGTGGTTATTGCCGTCGTAGTTGGTTTTGTTGTCCTCAGTCTTCTTGTTATGGCCATTTGGTTTGTACAGAAACGGAAGAGGAAGGAAACTGGATCAAAATTTGGTTATAGTATGACTTCCCCATATCCCTCGTCTCAAAATTCAGGTACTGTGTTCTTAAGGTCACAGTCTCCCCCTTTACATACTACTGGTTCTGGTAGTGATTTCATGTATTCACCATCAGAACCAGGTGGAGTAAGCAATTCAAGATCATGGTTCACATATGAGGAACTTGTTCAGgcaacaaatgggttctcagaAAAAAATCTGTTGGGTGAAGGCGGATTTGGTTGTGTCTACAAAGGCTTTCTCGTAGACGGAAGAGAAGTAGCTGTGAAACAGCTCAAAGTTGGAGGTGGACAAGGGGAGCGAGAGTTTAGAGCAGAAGTTGAGACTATTAGCCGAGTACATCATCGGCATCTGGTTTCTTTGGTGGGTTATTGTATATCTGAGCATCAGAGATTGCTTGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCATGGTCAAGACAGGTCGGTTATGGACTGGGCTACGAGAGTCAAGGTTGCAGCTGGTGCAGCTCGTGGAATAGCTTACTTACATGAAGACTGCCATCCGCGCATTATTCACCGAGACATAAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCTAGTTTCTGACTTTGGGCTTGCAAAATTAGCATTGGATTCATATACACATGTAACCACACGTGTGATGGGAACCTTTGGGTATATGGCACCAGAATATGCAACTAGTGGTAAATTGACTGAAAAGTCAGATGTTTACTCCTTCGGAGTTGTTCTTTTGGAGCTAATTACTGGTCGGAAGCCTGTCGATACCTCTCAGCCCATCGGTGATGAGAGCCTTGTCGAATGGGCTCGACCTCTATTGAGTCTAGCACTTGAGAATGAAGACTATGAAATATTGACAGATCCAAGACTAGAGCAGAAGTATGATAGAAATGAAATGTTCCGAATGATGGAAGCTGCTGCTGCATGTGTTCGTCATTCTTCAGCAAAAAGGCCGCGAATGAGTCAGGTTGTGAGAGCTCTGGATTCGTTAGATGAATTTGCAGATCTGAGTAACGGAATGAAACCTGGAGAGAGTAGAATGATGGATCCTTCGGTGCCATCTGCCCAAATCAGAATGTTCAGAAAGATGGCTTTCGGAAGTCAAGATTTGAGTTCCAGTTTCTTCAATGAGTCTCAGACTCAGAGTAGCTGGAGGAGCAGAAGAGAGCAGGAAGACCAAGACTCAGGGCAGTGGAAGATATGA 2148 0.4539 MLHLAITFGSKVIEDTERFDYFAIRNFGNWIPEEIMASASPSPNSSPSPANNSPPPPTNSSTTSPPPSSSNTPPPSPSPPQAVPSAPPPSSPSLSPPRPPDSPPASPPPPVTTAPPPIEASPPTPNSSPPPPVAASPPPKASAAPPSEPISPVSPPPPPVEVPTPPSSGSPPPPQGKPPESTPSPPSLTPPPSGSESPPPSTLPSTPPSVPSASSPPPNSSPAPPANTSAPGASTVPLPSIPTEKPTAKSTNDTDTSTNGKSSQGLSSGEVVVIAVVVGFVVLSLLVMAIWFVQKRKRKETGSKFGYSMTSPYPSSQNSGTVFLRSQSPPLHTTGSGSDFMYSPSEPGGVSNSRSWFTYEELVQATNGFSEKNLLGEGGFGCVYKGFLVDGREVAVKQLKVGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGQDRSVMDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEALVSDFGLAKLALDSYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPIGDESLVEWARPLLSLALENEDYEILTDPRLEQKYDRNEMFRMMEAAAACVRHSSAKRPRMSQVVRALDSLDEFADLSNGMKPGESRMMDPSVPSAQIRMFRKMAFGSQDLSSSFFNESQTQSSWRSRREQEDQDSGQWKI 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4493 715 MobiDBLite consensus disorder prediction 47 225 - -
Sto8g4493 715 MobiDBLite consensus disorder prediction 699 715 - -
Sto8g4493 715 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Sto8g4493 715 MobiDBLite consensus disorder prediction 686 715 - -
Sto8g4493 715 Pfam Protein tyrosine and serine/threonine kinase 372 642 IPR001245 GO:0004672|GO:0006468
Sto8g4493 715 MobiDBLite consensus disorder prediction 226 267 - -
Sto8g4493 715 Gene3D Phosphorylase Kinase; domain 1 345 444 - -
Sto8g4493 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Sto8g4493 715 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4493 715 SUPERFAMILY Protein kinase-like (PK-like) 347 642 IPR011009 -
Sto8g4493 715 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 93 693 - -
Sto8g4493 715 Gene3D Transferase(Phosphotransferase) domain 1 445 656 - -
Sto8g4493 715 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 93 693 - -
Sto8g4493 715 CDD STKc_IRAK 375 645 - -
Sto8g4493 715 MobiDBLite consensus disorder prediction 36 267 - -
Sto8g4493 715 SMART serkin_6 369 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4493 Sto-Chr8 47670042 47677546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4493 259 638 Trihelix Transcription Factor Family AT1G68690 65.969 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto8g4493 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4493 - - gmx:100790988 758.059