Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4492 ATGACAAGTATGGAAGACATGTCAGGCACATCAAGTAAAAGCTTAGAGATCTTATTGCACACCACCAAAACAATGAACACAAAAAACACAGTGAATCAAGTGAGACCTAGGAGGAGGAGGACCATTCCTGGTCATGGTCTAGAATTCCATAACATATCCTATAAAGTCATGAAGAAGCAGAAAAAGAATGGGGTTTGGATCAAGAGAGAAGCATACCTTCTTCATGACATCTCAGGGCAGGCCATTAGAGGCGAAATCATGGCGATCATGGGGCCTAGTGGTGCCGGAAAATCGACCTTTCTTGACGCCGTGGCCGGCCGGATTGCACAAGGGAGCCTGGAAGGATCAGTTAGAGTGGATGGAAAGCCaGTAACTACAAGTTACATGAAGATGGTGTCATCCTATGTGATGCAAGATGACCAATTGTTCCCTATGCTGACAGTTTCTGAGACATTAATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCCTTCTCCAGGGAGGAAAAGAAGAATAGAGTTCATGAGCTTCTTGAACAACTCGGCTTGCAGAGTGCAGCACATACATATATTGGGGATGAAGGGACGAAAGGAGTGTCAGGAGGGGAACGACGAAGGGTATCTATAGGCATAGACATCATTCATAAGCCATCACTTCTGTTTCTTGATGAACCAACCTCAGGACTTGATTCTACAAGTGCTTACAGTGTAGTGGAAAAGGTTAAAGCCATAGCTCGTGGTGGTAGCATCGTCCTCATGACCATACACCAACCTACATATAGAATTCAAAAGCTCCTGGACCAGATCACCGTCCTTGCAAGGGGAAGACTGATATACATGGGAAGGTCAGATGCACTTCCTTCTTACCTTTCTGGATTTGGAAGAACAGTACCAGATGGAGAAAACAGTATTGAGTATCTGCTAGATGTCATAAAAGAATATGACGAATCAACAGTTGGGCTAGACCCCTTTGTTCACTACCAACGTGATGGCCTAAAGCCAGACCAAGCAGCCATGACACCAGTTCTTAAAACACCAAAAAATCCAAGAAAACCTCACAAAAAGATGAATACCCCTGCATCTAAACATAAGATCAGCCAAGGCTTCACTGCTGGAACACCAACAAAACCAGACTCTTCCCATTctgaatatgatgatgatgatgatgatgaaagttttGATAACTCACTTGAGAGAACTGCTCAGACACCAAGGAATATGCCCAGTGGTGGTATCTATTTAGCTTCTCAGTTCTACAAAGAGTTCTCAGCCAAGGATTTTTCTGTCTGGCTTTACCATGGTGTGGTAGGAACCCCTCGACACACACCATCATGGACTCCTGCAAGAACTCCAGGATGGACCCCAGCAAGAACTCCAGGATGGACTCCAGCAAAAACTCCGGGATGGACACCTGCAAAAACTCCAGGATCAGTACGTATACCGGCGAAAACACAAACATTGCCCACGGTGAGTGAAACTATGGATTCCCCTGTACCTTCTCATGCAGAGTTTGAgattgaacaagttctggatgAGCCACACCTAGGATCCAAGTACGCAAACCCATGGCTGCGTGAGGTTGCAGTACTGTCATGGAGAACTGCACTCAATGTGATTCGAACACCGGAACTCTTCCTGTCCCGTGAGCTTGTGTTAACTGTTATGGCACTCATCCTCTCCACCGTCTTCAAAAACCTGGGTCACTACACTTTCAAAGACATAAATAGGCTTCTCAACTTCTACATTTTTGCAGTGTGCctggttttcttttcttccaatGATGCTGTCCCTAGTTTCATATTGGAAAGGTTCATCTTCATCAGAGAGACATCCCACTATGCTTACCGTGCTTCTTCGTATGTCATTTCTTCCCTCATTGTTTATCTCCCATTTTTCGCTCTTCAAGGTTTCACATTTGCTGTCATAACCAAAGTACTGCTCCATCTGAAAAGCAGTCTCTTCAACTTTTGGATGATCCTTTTTGCCTCTCTTGTTACTACCAATGCCTATGTGATGCTAGTTAGTGCACTTGTTCCAAGCTACATCACAGGGTATGCAGTAGTCATAGCTACAACTGCAATCTTCTTCTTGACTTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCTTTTACTGGAGGTGGCTCCACTATATTTCTGCAATCAAATACCCATTTGAGGCATTGCTGACAAATGAATTCAAGAATGATGAATGCTACACAGGGAACCCTGGAGATTTGTCCGCTGGCCCTCTAGGAGAGGTGAAGCAAAGTTTCCGCCATAAAGTGTTAAATGTCTCGAGTAATTGCTTAATAGGAGAAGATGTTTTATATTCAATGGATGTTCAGAAAGAAGACATTTGGTATGACATCTTCATCCTGCTAGCTTGGGGTGTTCTTTACAGGTTTTTCTTCTATTTGGTTTTGAGGTTTTACTCCaaaaatgagagaaaatga 2451 0.4264 MTSMEDMSGTSSKSLEILLHTTKTMNTKNTVNQVRPRRRRTIPGHGLEFHNISYKVMKKQKKNGVWIKREAYLLHDISGQAIRGEIMAIMGPSGAGKSTFLDAVAGRIAQGSLEGSVRVDGKPVTTSYMKMVSSYVMQDDQLFPMLTVSETLMFAAEVRLPPSFSREEKKNRVHELLEQLGLQSAAHTYIGDEGTKGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKAIARGGSIVLMTIHQPTYRIQKLLDQITVLARGRLIYMGRSDALPSYLSGFGRTVPDGENSIEYLLDVIKEYDESTVGLDPFVHYQRDGLKPDQAAMTPVLKTPKNPRKPHKKMNTPASKHKISQGFTAGTPTKPDSSHSEYDDDDDDESFDNSLERTAQTPRNMPSGGIYLASQFYKEFSAKDFSVWLYHGVVGTPRHTPSWTPARTPGWTPARTPGWTPAKTPGWTPAKTPGSVRIPAKTQTLPTVSETMDSPVPSHAEFEIEQVLDEPHLGSKYANPWLREVAVLSWRTALNVIRTPELFLSRELVLTVMALILSTVFKNLGHYTFKDINRLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHYAYRASSYVISSLIVYLPFFALQGFTFAVITKVLLHLKSSLFNFWMILFASLVTTNAYVMLVSALVPSYITGYAVVIATTAIFFLTCGFFLKRTQIPFYWRWLHYISAIKYPFEALLTNEFKNDECYTGNPGDLSAGPLGEVKQSFRHKVLNVSSNCLIGEDVLYSMDVQKEDIWYDIFILLAWGVLYRFFFYLVLRFYSKNERK 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4492 816 Pfam ABC-2 type transporter 255 311 IPR043926 GO:0140359
Sto8g4492 816 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524
Sto8g4492 816 Gene3D - 46 289 IPR027417 -
Sto8g4492 816 MobiDBLite consensus disorder prediction 360 377 - -
Sto8g4492 816 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 11 810 - -
Sto8g4492 816 MobiDBLite consensus disorder prediction 334 409 - -
Sto8g4492 816 PANTHER ABC TRANSPORTER 11 810 - -
Sto8g4492 816 MobiDBLite consensus disorder prediction 445 478 - -
Sto8g4492 816 CDD ABCG_EPDR 47 280 - -
Sto8g4492 816 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 298 IPR003439 GO:0005524
Sto8g4492 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 288 IPR027417 -
Sto8g4492 816 Pfam ABC-2 type transporter 526 732 IPR013525 GO:0016020|GO:0140359
Sto8g4492 816 SMART AAA_5 83 283 IPR003593 -
Sto8g4492 816 Pfam ABC transporter 74 226 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4492 Sto-Chr8 47658857 47663461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4492 84 394 Calmodulin-binding Proteins AT2G36910 23.248 6.82e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4492 8 47658857 47663461 Sto8g4492 8 47658857 47663461 ECH