Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4489 ATGCAGTGGTCATTCTCATCAAACAAGGTTTCTGCTGTTCCTCAATTGCTGTCGTTTAAGGCTTCTCAGGAAGACAAAACGACAAGGAAGAGCATTAATAATCTCGATCCGATTTCATCGTCGTCAGGATATAACATGACGACATCCACCACCACTGCCGCCGCTGCCGCCGCTGTCGCCGATGCGTATGACTCTAATCATTTCAAACCAATCTTCAAGAGAAGTGTGAGCATGGGGGCACAAGCAAGAAGCAAAGATGGAATGGGAGCAATGTATAGTCTTCTTCATCCATCAAGTGGTCCTCAAGATCAAGATCAAGCAAGAATATTTTCAGtgtctaataataataataataaccaaTCAAATCTTCAGAGGAGTTCTTCTAGAATTGTTCTTCAATCCAATGTGGTTTTGTGTGGTAATTCTGCAAATATTAAACCACACTTCTCTCTTGCTCATGCtcatggaggaggaggaggactcTCCCAGCCATCTAAAGCTTCCAATAATATTGTTGGCACCACTGATTTaagGAACTCTCCCAAATCCTCAGCCAAACCTACTCAGCTGACCATATTCTATGCTGGTTCCGTGTGTGTTTATGAAGACATATCTCCTGAGAAGGCTCAAGCTATCATGTTACTAGCTGGAAATGGCACTTCAAGTAGTCCAATTCAAAGCAAGGCAGTTTCTTCACCAAACATTACTACTACCACTAGGCCATCATCCAAAGATGATGCTTTTATCATAAGCCAATCCTATCCCTCACCTTTACCTCTAAGCCCTCTTCCCATGACCTTCCATGCAGCTTCTAATTGTtctagaggaggaggaggaggatctTCTTgcaacattaataataataataataataatgaacttGCACTTATCAGACCACTAGtagtatcttcttcttcttctgcacCTAATAATAATAGCCATAATTTGGAGTCTCCTAATGTAGTTGCTTCTGCAAAATCTGCCCCTCCAAAAATGGCTCCACCACCTGTAGGGTTGCCTCAAGCACGTAAAGCGTCCTTGGCTCGGTTTTTAGAAAAGCGCAAGGAAAGAGTGACGGGCACATCGCCGTACTATATGAACAAGAAATCAATGCCAGAAGGCAGCACTTCAAGATCAGATGATATTGATTTCTCCATCAATTCCACTACTTCCTTCAATCCTGCATGGCTACAAGCAGAAAGAACAGTGACAAAAACAGTTTCATCAGGTCTGATCCCAGACTTGATCATCTCATCAAAAAGATTCAGTGCAATTTCCCCATGCCCATGGATTCCATATCCACCAATTATAGCCGTCCACGAAATGACACTTTTCTCAGCCATGGAATCAAAAATTGCACGAGCCTTTACCAAATTACCACACCTGGCATACATATTAATTAGGGCGTTTGTTAGAAACGAATTGGAACCAAAGCTACAATACTCTATCTGTCGCTCTACTTCAGAACCAATGCTCTGGGCACCAAGGTTGGCACAAGAAGATAGAACCCCAAGAAGTGTCACGGGATCAGGACGTATCTTAGTCAACTTCATCTCACGGAAAAGTTCCAAAACATGCCTGGCAAGCCCATTTTGTGCATACCCGGAAATCATCGCATTCCAATTGGGAACCCACGAGAGGGAACAAGAGGAGGGCACAAGACTTGAGGGCGACGGGAAAGGTGAAGGTATTGGGAAAGCAACCAGAGCGGAGCATGTGACGGTAGAGAGTGAGAGCTTGGGAGAACTGGCGTTGCTTGGCCAGTTCCCTTAA 1773 0.4106 MQWSFSSNKVSAVPQLLSFKASQEDKTTRKSINNLDPISSSSGYNMTTSTTTAAAAAAVADAYDSNHFKPIFKRSVSMGAQARSKDGMGAMYSLLHPSSGPQDQDQARIFSVSNNNNNNQSNLQRSSSRIVLQSNVVLCGNSANIKPHFSLAHAHGGGGGLSQPSKASNNIVGTTDLRNSPKSSAKPTQLTIFYAGSVCVYEDISPEKAQAIMLLAGNGTSSSPIQSKAVSSPNITTTTRPSSKDDAFIISQSYPSPLPLSPLPMTFHAASNCSRGGGGGSSCNINNNNNNNELALIRPLVVSSSSSAPNNNSHNLESPNVVASAKSAPPKMAPPPVGLPQARKASLARFLEKRKERVTGTSPYYMNKKSMPEGSTSRSDDIDFSINSTTSFNPAWLQAERTVTKTVSSGLIPDLIISSKRFSAISPCPWIPYPPIIAVHEMTLFSAMESKIARAFTKLPHLAYILIRAFVRNELEPKLQYSICRSTSEPMLWAPRLAQEDRTPRSVTGSGRILVNFISRKSSKTCLASPFCAYPEIIAFQLGTHEREQEEGTRLEGDGKGEGIGKATRAEHVTVESESLGELALLGQFP 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4489 590 ProSiteProfiles Tify domain profile. 183 218 IPR010399 -
Sto8g4489 590 MobiDBLite consensus disorder prediction 363 380 - -
Sto8g4489 590 MobiDBLite consensus disorder prediction 304 340 - -
Sto8g4489 590 MobiDBLite consensus disorder prediction 304 322 - -
Sto8g4489 590 Pfam Jas motif 340 365 IPR018467 -
Sto8g4489 590 SMART tify_2 183 218 IPR010399 -
Sto8g4489 590 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 398 IPR040390 -
Sto8g4489 590 Pfam tify domain 185 217 IPR010399 -
Sto8g4489 590 MobiDBLite consensus disorder prediction 548 569 - -
Sto8g4489 590 MobiDBLite consensus disorder prediction 361 380 - -
Sto8g4489 590 MobiDBLite consensus disorder prediction 223 242 - -
Sto8g4489 590 PANTHER PROTEIN TIFY 7 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4489 Sto-Chr8 47634060 47640019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4489 1 382 Tify Gene Family AT3G17860 37.340 3.62e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto8g4489 tify 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4489 K13464 - gmx:100807288 196.052