Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4484 ATGGTATTCAAGGGAAGGTTCTTCAACTTCAAGAAATCCTCCGACTCTTCCAGCCCCGATGGGTCGCCCAATAGCGCCCGATCATTCGGCTCCAATTCCCCCAGCCGATCCGACAAGAAGAAGGCCAAATCAGCTCTCAAGGATCCCCCCATCGCTGCCGGTGCTGCGGCGTGCCGCCAGGGGCAGCAGCAGGTGAAGGACGCcacgaagaagaaggatgggaaAGGGAAGGAGAGTCTAACGTCGTCGAAGCCAAGCTCTGGCGTGGTGGAATCGGGTTCCAGTTCGTTGTTACCGAGTTCTGGGTTGAAGTCGAAGCAGGCTGCGGCGGGGGCGGCGGTTTCGCCAATTTTGGCATCGTCGCTGGGATTGAATAGGATAAAGACGAGATCAGGACCACTACCACAGGAGAGTTTCTTCGGTTTTAGAAATGATAAGGGGTCGACACTTGGTGCAAGTAATCTCTCCAGGCATGGTGGTGATGGGAGTTCAGGGTCAGGAAGTGGGGGGAAGAAGGAGTCAGTGAATTGCAGTAGAGTGGCGTTTCGTGAGAGTTCTGGAATGGGAAATTGGGTTGATAATGGAAGTAATTCCGATAGTATGTCCACAGGGAGTGCTCCGTCCAGGGACCAGAGTCCGAATGTATTGCCACCGTCGAGGCTTCAGAACGGGGAATCGTCGTCCGAAGCAGCAGGAAGACAGGAATCCATACGGTCTCAGTCTGAAGGCTTAAGAAGTGCAGATGTTTGCACTCCTGAGACAGCTTACGATTATGAAAACCCAAAGGAGTCTGAATCTCCTCGATTTCAAGCTTTGTTACGTGTCACAAGTGCTCCGAGAAAGAGGTTTCCCTCTGACATTAAGAGTTTTTCCCATGAGCTGAATTCCAAAGGTGTCCGGCCTTTTCCATTTTCGAAGCCTCGAGGATTAAATAACGTGGAGGAGATCTTAGTTGTTATTCGGGCAAAATTTGATAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCGGGAGATCTGGTTGGAGTTCTTGAAAAAAATGCAGATACTCACCCTGAGTGGCAAGAGACGATTGAGGACTTGCTAGTGTTGGCTAGGAGCTGTGCTATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTAGATGATAGGCGTCAAGAACTTCCTCCAGGGATGCTTAAGCAGCTTCACACCCGAATGCTTTTCATTCTCACAAGGTGTACGAGGTTGTTGCAATTTCACAAGGAAAGTGCTTTGGCTGAGGATGAACACGTTTTCAATCTCCGTCAATCTAGACTGTTGCACTCTGCTGAAAAACGGATTCCTCCTGGTTTGGGAAAGGATGAAAAATGTTCTAGTGCTGCGATGGTGTCAAAGGCGTCAAAACCTTCAGCCAAAAAATCTTATAGTCAAGAGCAGCATAGCTTGAATTGGAAGAAAGATGTTACACAGCCAGAAAATCTTTCAATTCGTGCTGATAACGCATCAAAACAAGATTCTTTTACAGGCATGGATCGGATGGCTTCTTGGAAGAAATTCCTGTCTCCACCGAGTAAAAGCCCAAAAGAAGCAGCTCAGTTGAAGGACCAGAATTTTGGGAGGGTTGAACCTTCAAAGCTATCTATCAATAAGCGATCAAATTCTGACATGGATCTGTGTGCTGCTAAGCCATCTGAGCTTCTTCATATTAAAGATTCCCATGAACATGCTTCGAAGCACCAACACAAAGCATCTTGGGGCTACTGGGGTGAACATCAGAATATTGGTGAGGAAAATTCAATAATTTGTCGTATATGTGAGGAGGAAGTTCCGACTTCACATGTTGAAGAACATTCAAGAATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTCTAAGTGTCAATGAGCGTCTTGTTAGAGTTGCTGAAACCTTAGAAAAGATGATGGAATCATGTACACAGAAGGATATCCAGCAAATAGTGGGAAGTCCCGATGTTGGAAAGGTGTCAAATTCAAGTATGACTGAAGAATCTGATGTTCTCTCTCCAAAACTTAGTGATTGGTCTCGAAGAGGCTCAGAGGATATGTTAGACTGTTTCCCTGAAGCCGAAAATTCTGCTTTTATGGATGACCTAAAGGGATTTCCTCTGATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACTTCATCTGCAGGGAGTATGACTCCTAGATCTCCTCTAATGACACCTAGGACAAGTCAGATTGACTTGCTCTTGGCGGGCAAGGGTGCTTATTCTGAACAGGATGATTTTCCACAGATGAATGAACTTGCCGATATTGCACGATGTGTAGCAAATACACCTCTGGATGATGATCACTCAATGTCATATCTATTATCTTGTCTTGATGACTTGCGGGTTGTTTTAGACAGAAGAAAATTCGATGCACTTACAGTGGAGACCTTTGGAACACGTATCGAGAAGTTGATAAGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGAAGATGAAAAGATAGATATAACGAGCACTGTAATTGACGAAGATGCTCCCTTGGATGATGATGTAGTTCGTAGCTTGAGAACAAGCCCTATCCATTCTTCAAAGGACCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATTAGTCGGGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACAACTGGGGATCTGTTCGCGATAAAGGTTCTCAAGAAGGCAGACATGATCCGGAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAACCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGTGAGAACTTGTACCTTGTCATGGAATATCTTAATGGAGGTGACCTGTATTCGTTATTAAGGAATTTAGGTTGCCTAGATGAAGAAGTTGCTCGCGTATATATAGCTGAAGTGGTGCTTGCATTAGAATATTTGCATTCTCTGCGGGTGGTTCACCGTGACTTGAAGCCTGACAATCTGTTGATTGCGCATGATGGTCACATTAAGTTGACAGACTTTGGGCTTTCAAAAGTTGGTCTAATCAACAGCACTGATGATTTGTCCGGTCCAGCAGTCAGTGGGACATCCCTACTTAGTGAGGATGAACCTCAGTTATCTACATCTGAGCATCAAAGCGACAGAAGGAAGAAACGTTCTGCTGTGGGTACACCTGATTATTTAGCACCAGAGATACTTTTGGGAACAGGACATGGGTATACGGCAGATTGGTGGTCTGTTGGCGTCATTTTATTTGAATTGCTTGTTGGCATTCCACCCTTCAATGCAGAGCATCCTCAGACTATATTTGATAATATCCTTAATCGTAATATTCCATGGCCCCGGGTGCCAGAAGAAATGAGTCCTGAAGCAGAAGATCTTATTGATCGattatTGACTGAAGATCCTAATCAGAGACTTGGAGCCCGGGGGGCATCAGAGGTGAAGCAGCATGTTTTCTTCAATGATATAAACTGGGACACACTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTGGATACTAGTTATTTCACAAGTCGCTATTCATGGAATACTACTGATGGCCTTGCATATCCAGCGAGTGATATTGAGGAATACAGTGATGCTGATAGCTTAAGTGACAGTAGTAGTTGCTTGAGCAATCGCCAAGATGAAATCCATAAGCAGGGAGATGAATGCAGGGGTCTTGCGGAGTTTGAGTCTGGCTCATCTGTCAATTACTCCTTTAGTAACTTCTCCTTTAAGAATCTCTCCCAGCTTGCTTCAATCAACTATGATCTTCTCACCAAGGGATGGAAGGACGACCCATCTACAAATTCTAGTGCATGA 3903 0.4458 MVFKGRFFNFKKSSDSSSPDGSPNSARSFGSNSPSRSDKKKAKSALKDPPIAAGAAACRQGQQQVKDATKKKDGKGKESLTSSKPSSGVVESGSSSLLPSSGLKSKQAAAGAAVSPILASSLGLNRIKTRSGPLPQESFFGFRNDKGSTLGASNLSRHGGDGSSGSGSGGKKESVNCSRVAFRESSGMGNWVDNGSNSDSMSTGSAPSRDQSPNVLPPSRLQNGESSSEAAGRQESIRSQSEGLRSADVCTPETAYDYENPKESESPRFQALLRVTSAPRKRFPSDIKSFSHELNSKGVRPFPFSKPRGLNNVEEILVVIRAKFDKAKEEVNSDLAIFAGDLVGVLEKNADTHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESALAEDEHVFNLRQSRLLHSAEKRIPPGLGKDEKCSSAAMVSKASKPSAKKSYSQEQHSLNWKKDVTQPENLSIRADNASKQDSFTGMDRMASWKKFLSPPSKSPKEAAQLKDQNFGRVEPSKLSINKRSNSDMDLCAAKPSELLHIKDSHEHASKHQHKASWGYWGEHQNIGEENSIICRICEEEVPTSHVEEHSRICAIADRCDQKGLSVNERLVRVAETLEKMMESCTQKDIQQIVGSPDVGKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEAENSAFMDDLKGFPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEQDDFPQMNELADIARCVANTPLDDDHSMSYLLSCLDDLRVVLDRRKFDALTVETFGTRIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLDDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLSEDEPQLSTSEHQSDRRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRNIPWPRVPEEMSPEAEDLIDRLLTEDPNQRLGARGASEVKQHVFFNDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTTDGLAYPASDIEEYSDADSLSDSSSCLSNRQDEIHKQGDECRGLAEFESGSSVNYSFSNFSFKNLSQLASINYDLLTKGWKDDPSTNSSA 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4484 1300 MobiDBLite consensus disorder prediction 522 551 - -
Sto8g4484 1300 CDD STKc_MAST_like 891 1179 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 147 247 - -
Sto8g4484 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1004 1016 IPR008271 GO:0004672|GO:0006468
Sto8g4484 1300 Pfam Protein kinase domain 885 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4484 1300 SUPERFAMILY Protein kinase-like (PK-like) 882 1211 IPR011009 -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 65 79 - -
Sto8g4484 1300 Coils Coil 637 657 - -
Sto8g4484 1300 ProSiteProfiles AGC-kinase C-terminal domain profile. 1175 1282 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto8g4484 1300 Coils Coil 310 330 - -
Sto8g4484 1300 Gene3D Transferase(Phosphotransferase) domain 1 969 1192 - -
Sto8g4484 1300 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 1298 - -
Sto8g4484 1300 SMART serkin_6 885 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4484 1300 MobiDBLite consensus disorder prediction 465 509 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 1046 1075 - -
Sto8g4484 1300 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 28 1298 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 665 684 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 729 748 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 665 689 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 80 103 - -
Sto8g4484 1300 Gene3D Phosphorylase Kinase; domain 1 883 1203 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 10 33 - -
Sto8g4484 1300 ProSiteProfiles Protein kinase domain profile. 885 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g4484 1300 MobiDBLite consensus disorder prediction 1060 1075 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 447 509 - -
Sto8g4484 1300 MobiDBLite consensus disorder prediction 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4484 Sto-Chr8 47577224 47590643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4484 1 1294 AGC Kinase Gene Family AT3G17850 68.058 0.0 1684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Sto8g4484 Pkinase 1.1e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4484 8 47577224 47590643 Sto8g4484 8 47577224 47590643 ECH