Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4452 ATGGAGTTCGGCTTCTTCCGAGGCTTACCGGAGGATATCTTCCTCCTTGACATTGCCGGCCAATTTGCCTTTCTCATTGACATCTTTGTCCGATTCTCCGTTGCTTATCGCGACACTCACTCTCATACCTGGGTCTACAATCGCCGTCAAATCGCCTCCAGGTATTTCAAGTCTCGGTTCACGCTTGACATTCTGAGTTGTCTCCCGTGGGATTATATTTACAAGGCTACTGGAAGGAAAGAGCCAGTCAGGTATCTTCTATGGATTAGGCTAAGTCGAGCATACAGAGTGATTGAGTTTTTTGACAGGCTGGAGAAAGATATTAGGATCAATTACCTCTTTACTAGAATTGTGAAACTTCTAGTTGTTGAACTCTATTGCACACATACGACTGCTTGCATCTTCTACTATCTAGCTACCACTATGCCCCCCTCTAAGGAAGGTTATACATGGATAGGCAGCTTGAAGATGGGTGACCACAGCTATTCTGACTTTAGACATATTAGTCTTTGGAGGCGTTATGTGACATCACTCTACTTCGCAATTGTGACCATGGTAACTGTTGGCTATGGTGATATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATTTTTGTTTCCTTTGACATGATTTTGGGTGCTTATCTTCTTGGTAACATGGCAGCATTAATCGTGAAAGGATCAAGAACAGAGAAATTTAGGGATAAAATGACTGAACTTATCAAGtacatgaataaaaataatttggaCAAGCAGATTAGTAAGGAGATTAAAGGGCATTTGCGCTTACAGTTTGACCGCAGCTACACGGAGGCTACCATTGTTGAGGATATTCCAGCCTCCATTCGCACAAAGATTTCAGTGAATTTGTATGAGCAGTTCATTCAGCAAGTTCATCTTTTCAAGGGATGCTCTTCTGGGTTCATTAAGCAGATTGCAATCAAAGTCCATGAAGAGTTTTTCCTCCCAGGAGAAGTGATTATGGAGAAAGGAAATGTAGTAGATCAACTGTACCTTGTATGCCATGGTGAGCTGGATGAGCTAAGAAGGGAAGATGATGAGAGAGAAGATCCAATTAAGCAATTTCAAACCTATAGTTCCTTTGGCGAGGTTTCTTTTCTTTGCAATATGCCTCAACCTTATACGGTTCGAGCCCATGAATTTTGCAAGGTTTTGCGACTTGACAAGCAATCCTTTACAGAAACACTGAAGAAATACTTTTTCGATGGCCGAATTATCTTAGACAATCTTCTTGAGGGAAAAGAATCCAGTCTTCAACGTAAACTTTTGGAATCAGACTTTAGCTTGACTATTAGAAATCATGAAAAGGAGCTGGCTATGAGGATTAATTGTGCTGCCTATGAGGGGGATTTCTATCTTTTAAAACATTTGATTAGTTCTGGAGCAGATCCCAATAAAGTTGATTATGATGGAAGATCGCCCTTGCATATCTCTGCTTCTCGAGGATATGTAGATATTGCTTGCTTTCTTATAGAACAAGGAGTGAATATCAATTACCCTGATAAGTTTGGGAGTACTCCCTTGCTTGAAGCCATAAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTAAATGCGAGGGCTACTCTTACTATTGATGACGCTGGAtgttttctctgcttgactgtTGCAAACAAGGAGTTGGACCTTTTAAGAAAGCTGTTAGCTCATGGTATTAATCCAGATTCCAGAAATTACGATCAACGAACACCTCTTCACATAGCTGCCTCCGAGGGTTTGTTTAAAGCAGCTGAATTGCTTTTAGAAGCAGGAGCAAGTGTTTTATCAAAGGACAGGTGGGGCAATACACCACTTGATGGAGCTCGTATAGGTGGAAATAGGAAAATGATCAGAATGCTCGAAGTAGCAAAAATTTCCCAGCTGGCTGAGTTATCCAATTCCAACAGTATTCAAGAAACTCATGCAACGTTTCTCTTGCCATCCAGAGATGAAAATCCAAAAAAGAAATGTACAGTATTTCCTTTCCACCCTAGGCATCACAATAAGGACAAAAGAGCGGGAGCTGTCCTGTGGGTTCCACAAAGCATTGAAGAGCTAATAAAGGTTGCAAATGAACAATTGAAATCTTCTAGCGGTTCCTGTATTTTATCAGAACATGGTGGTAAAATTCTTGATGCCGACATGATTAGCAATGGTGAGAAGCTATACCTTGTAAGTGAAGCATTCATGGAGGTGCAAGAAGAGGAAGAATGTTCTGGTCATCCTATTGAGCAGAACAGAATAGGAAATCAGCAACGGTTAAACAGATGGGAAACACGAGAGAATCCGTTAAAGGCATCCCAGGAAGACATCACAATTGAAATCGTGCAGTGGATTGGCCACCGCATCGTCGATTTCCAGCAAGACGCCCACAGTTGCGTTAGGAACTTCAAAGACGACTTCGGTGCGGCCGATGACTCATCTGATGATCGCTCACGCTTGCTGCCGGAGATAACGACCTGGACATCGCCACACTGCAGATTCGGACCCAAATCCCATATCAACCACGCGTCGATTGTTGTTGAGCATACCCACGGCTCCAGATTCGTCAACGTGCCACAAAGCTCCGATGTACTCCTCAACGCGCCACCACGCCACCGCGCAACGAAGAAAGAAAGCAAGCATTTTTGGAGGAGCAAAGCAAAAAGCAAAAAAGGGAGAAGGAGTGTTACACTACTTGACATAAAGCTGACGGACCGACCCATCCAGTTGGGCGTTGCGAATGAACAAAATTACGAAGCCAACGGGCAACGGAGCCAAACAAAGCCAGTTGCGGAGCCAACGGGCAACGGAGCCAGTTACGAAGCCAACCGGCAACGGAGCCAAACAGAGCCAGTTGCGGAGCCAACGAGCAACAGAGCCAGTTGCGAAGCCAACCGGCAACGGAGCCAAACGGAGCCAACCGCTGACCCAGCAGACGGAAGAGCCAGCTGCGGAGCCATCTGA 2973 0.4349 MEFGFFRGLPEDIFLLDIAGQFAFLIDIFVRFSVAYRDTHSHTWVYNRRQIASRYFKSRFTLDILSCLPWDYIYKATGRKEPVRYLLWIRLSRAYRVIEFFDRLEKDIRINYLFTRIVKLLVVELYCTHTTACIFYYLATTMPPSKEGYTWIGSLKMGDHSYSDFRHISLWRRYVTSLYFAIVTMVTVGYGDIHAVNVREMIFVMIFVSFDMILGAYLLGNMAALIVKGSRTEKFRDKMTELIKYMNKNNLDKQISKEIKGHLRLQFDRSYTEATIVEDIPASIRTKISVNLYEQFIQQVHLFKGCSSGFIKQIAIKVHEEFFLPGEVIMEKGNVVDQLYLVCHGELDELRREDDEREDPIKQFQTYSSFGEVSFLCNMPQPYTVRAHEFCKVLRLDKQSFTETLKKYFFDGRIILDNLLEGKESSLQRKLLESDFSLTIRNHEKELAMRINCAAYEGDFYLLKHLISSGADPNKVDYDGRSPLHISASRGYVDIACFLIEQGVNINYPDKFGSTPLLEAIKNGHEEVASLLVNARATLTIDDAGCFLCLTVANKELDLLRKLLAHGINPDSRNYDQRTPLHIAASEGLFKAAELLLEAGASVLSKDRWGNTPLDGARIGGNRKMIRMLEVAKISQLAELSNSNSIQETHATFLLPSRDENPKKKCTVFPFHPRHHNKDKRAGAVLWVPQSIEELIKVANEQLKSSSGSCILSEHGGKILDADMISNGEKLYLVSEAFMEVQEEEECSGHPIEQNRIGNQQRLNRWETRENPLKASQEDITIEIVQWIGHRIVDFQQDAHSCVRNFKDDFGAADDSSDDRSRLLPEITTWTSPHCRFGPKSHINHASIVVEHTHGSRFVNVPQSSDVLLNAPPRHRATKKESKHFWRSKAKSKKGRRSVTLLDIKLTDRPIQLGVANEQNYEANGQRSQTKPVAEPTGNGASYEANRQRSQTEPVAEPTSNRASCEANRQRSQTEPTADPADGRASCGAI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4452 990 SUPERFAMILY Ankyrin repeat 404 629 IPR036770 -
Sto8g4452 990 PANTHER POTASSIUM CHANNEL AKT1 1 737 IPR045319 GO:0005249|GO:0006813
Sto8g4452 990 SUPERFAMILY cAMP-binding domain-like 230 419 IPR018490 -
Sto8g4452 990 Pfam Ion transport protein 15 224 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto8g4452 990 Pfam Cyclic nucleotide-binding domain 322 408 IPR000595 -
Sto8g4452 990 Pfam Ankyrin repeats (many copies) 563 617 IPR002110 GO:0005515
Sto8g4452 990 Gene3D - 3 228 - -
Sto8g4452 990 Gene3D - 545 639 IPR036770 -
Sto8g4452 990 ProSiteProfiles cAMP/cGMP binding motif profile. 302 405 IPR000595 -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat region circular profile. 576 608 - -
Sto8g4452 990 ProSiteProfiles KHA domain profile. 665 751 IPR021789 -
Sto8g4452 990 Gene3D Jelly Rolls 290 410 IPR014710 -
Sto8g4452 990 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto8g4452 990 PRINTS EAG/ELK/ERG potassium channel family signature 126 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto8g4452 990 PRINTS EAG/ELK/ERG potassium channel family signature 174 191 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto8g4452 990 PRINTS EAG/ELK/ERG potassium channel family signature 218 227 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto8g4452 990 MobiDBLite consensus disorder prediction 872 892 - -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Sto8g4452 990 SMART cnmp_10 302 420 IPR000595 -
Sto8g4452 990 Pfam KHA, dimerisation domain of potassium ion channel 664 733 IPR021789 -
Sto8g4452 990 Gene3D Helix hairpin bin 230 289 - -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat profile. 512 544 IPR002110 GO:0005515
Sto8g4452 990 PANTHER POTASSIUM CHANNEL SKOR-LIKE 1 737 - -
Sto8g4452 990 SMART ANK_2a 479 508 IPR002110 GO:0005515
Sto8g4452 990 SMART ANK_2a 609 638 IPR002110 GO:0005515
Sto8g4452 990 SMART ANK_2a 545 572 IPR002110 GO:0005515
Sto8g4452 990 SMART ANK_2a 512 541 IPR002110 GO:0005515
Sto8g4452 990 SMART ANK_2a 576 605 IPR002110 GO:0005515
Sto8g4452 990 SMART ANK_2a 446 475 IPR002110 GO:0005515
Sto8g4452 990 MobiDBLite consensus disorder prediction 917 979 - -
Sto8g4452 990 Pfam Ankyrin repeats (3 copies) 453 541 IPR002110 GO:0005515
Sto8g4452 990 MobiDBLite consensus disorder prediction 877 892 - -
Sto8g4452 990 SUPERFAMILY Voltage-gated potassium channels 11 227 - -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat profile. 479 511 IPR002110 GO:0005515
Sto8g4452 990 CDD CAP_ED 302 416 IPR000595 -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat region circular profile. 479 511 - -
Sto8g4452 990 ProSiteProfiles Ankyrin repeat region circular profile. 512 543 - -
Sto8g4452 990 MobiDBLite consensus disorder prediction 917 990 - -
Sto8g4452 990 Gene3D - 411 544 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4452 Sto-Chr8 47240571 47254851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4452 1 608 Ion Channels AT5G37500 60.159 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4452 K21867 - jre:108993203 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4452 8 47240571 47254851 Sto8g4452 8 47240571 47254851 ECH