Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4332 ATGTGTAGTAGAGGCCATTGGAGGCCAGCGGAGGATGAGAAACTTAGGGAGTTGGTGGAAAGATATGGGCCTCATAATTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAgGGAAGAGTTGCAGATTAAGGTGGTTCAATCAACTGGACCCAAGAATAAACAGGAGGCCATtcacagaggaagaagaagagaggcttCTTGCTTCTCATAGGATTCATGGCAACAGATGGGCTGTGATTGCCAGGCTTTTTCCGGGACGCACTGACAATGCTGTCAAGAATCACTGGCACGTCATGATGGCCCGGATTCGTCGTGAAAGTGAATCAGTAGAGTTCTATGACTTTCTTCAAGTAAACACAGAGTCTAACAGAAGTGAAGTAACAGAGAATAATGGAAGAAGAGAAGATGAGGAAGTGAATCAAGATGATGGTGTTCCtccatttattgattttttgtCTGTTGGAACCTCCTAA 477 0.4109 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVMMARIRRESESVEFYDFLQVNTESNRSEVTENNGRREDEEVNQDDGVPPFIDFLSVGTS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4332 158 PANTHER MYB-RELATED PROTEIN A-LIKE 1 108 - -
Sto8g4332 158 PANTHER MYB-RELATED PROTEIN A-LIKE 108 157 - -
Sto8g4332 158 Gene3D - 4 55 - -
Sto8g4332 158 MobiDBLite consensus disorder prediction 128 142 - -
Sto8g4332 158 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sto8g4332 158 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Sto8g4332 158 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Sto8g4332 158 CDD SANT 7 48 IPR001005 -
Sto8g4332 158 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Sto8g4332 158 Gene3D - 57 141 - -
Sto8g4332 158 SMART sant 3 52 IPR001005 -
Sto8g4332 158 SMART sant 55 103 IPR001005 -
Sto8g4332 158 Pfam Myb-like DNA-binding domain 7 67 - -
Sto8g4332 158 CDD SANT 58 101 IPR001005 -
Sto8g4332 158 MobiDBLite consensus disorder prediction 124 147 - -
Sto8g4332 158 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Sto8g4332 158 PANTHER MYB PROTEIN-RELATED 108 157 - -
Sto8g4332 158 PANTHER MYB PROTEIN-RELATED 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4332 Sto-Chr8 46158016 46160741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4332 74 158 MYB Transcription Factor Family AT1G17950 35.165 8.31e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g4332 Myb_DNA-bind_6 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4332 K09422 - mnt:21407830 261.536