Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4329 ATGCCGTCCACGTCCATACCCAAGGATGCGGCGTATCAGATAATCAACGACGAGTTGATGCTGGACGGTGCGCCTAGGCTGAACTTGGCCTCCTTTGTGACCACTTGGATGGAGCCCGAGTGCGAGAAGCTCATCATGGCCACTCTCAACAAGAACTATGTtgatatggacgagtatcctgtCACCACTGAGCTTCAGAACCGATGTGTGAATATGATAGCACATCTGTTCCGTGCTCCGATTGGAGATGATGAAGCTGCTGTAGGCGTTGGAACCGTGGGCTCATCGGAGGCCATCATGTTGGCTGGTCTTGCTTTCAAAAGGAAATGGCAGAATGAGAGGAAATCTCAGGGCAAACCGTTTGATAAGCCTAACATTGTCACTGGGGCTAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTAGAGCTGAAGGAGGTGAAGTTGAGTGAGGGATATTATGTGATGGACCCAGAGAAAGCAGTGGAGATGGTGGATGAGAACACTATTTGTGTTGCAGCAATATTAGGGTCCACTCTCACTGGGGAGTTTGAGAATGTGAAGCTTTTGAATGAGCTGCTAACAAAGAAGAACAATGAGACAGGATGGAACACCCCGATTCATGTCGATGCCGCCAGTGGAGGATTTATTGCTCCGTTCCTGTACCCTGATCTTGAGTGGGATTTccgtttgccgttggtgaagaGCATCAATGTTAGTGGTCACAAATATGGTCTTGTCTACCCTGGTGTCGGCTGGGTTGTCTGGAGGAGTAAAGATGACTTGCCTGAGGATCTTGTCTTCCATATCAACTATCTTGGCTCTGATCAGCCTACTTtcaccctcaatttctccaaagGTTCAAGTCAAATAATTTCTCAATATTACCAGTTTATACGTCTTGGCTTTGAGGGTTATAAGAACATAATGGAGAATTGCATGGAGAACGCAAGAGTACTGAAGGAAGGAATAGAGAAAACAGGGCGGTTCGACATTGTGTCCAAGGATGATGGTGTGCCACTGGTAGCTTTCTCTTTGAAAGATAGCAGCCAGCATACAGTGTTTGAGATATCAGACCATTTGAGAAGATTCGGGTGGATTGTTCCGGCCTACACCATGCCGCCGGACGCGCAGCACATCGCCGTCCTTCGGGTTGTAATCCGAGAGGATTTCAGCCGGAGCCTGGCCGAGAGACTTGTTTGTGACATTGAAAAGGTTTTGAAGCTCTTGGACACACTTCCTAGCCCTATTGGCTTCACCAAAGAGGCCCATGTCGCAGCTATAAGTAATGAGACAGATCAGAATAAGGTTAAGAAGAGTGCAATGGAGTCTCAGAAAGAGATTGCCTTGTATTGGAAGAGGCTTGTGGAAGGCAAGAAAACTGGAGTGTGCTAG 1404 0.4537 MPSTSIPKDAAYQIINDELMLDGAPRLNLASFVTTWMEPECEKLIMATLNKNYVDMDEYPVTTELQNRCVNMIAHLFRAPIGDDEAAVGVGTVGSSEAIMLAGLAFKRKWQNERKSQGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLTGEFENVKLLNELLTKKNNETGWNTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPEDLVFHINYLGSDQPTFTLNFSKGSSQIISQYYQFIRLGFEGYKNIMENCMENARVLKEGIEKTGRFDIVSKDDGVPLVAFSLKDSSQHTVFEISDHLRRFGWIVPAYTMPPDAQHIAVLRVVIREDFSRSLAERLVCDIEKVLKLLDTLPSPIGFTKEAHVAAISNETDQNKVKKSAMESQKEIALYWKRLVEGKKTGVC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4329 467 Gene3D - 330 417 - -
Sto8g4329 467 Gene3D - 1 34 - -
Sto8g4329 467 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 350 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto8g4329 467 SUPERFAMILY PLP-dependent transferases 1 412 IPR015424 -
Sto8g4329 467 PANTHER GLUTAMATE DECARBOXYLASE 1 467 - -
Sto8g4329 467 PANTHER GLUTAMATE DECARBOXYLASE 1 467 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sto8g4329 467 Gene3D - 35 329 IPR015421 GO:0003824
Sto8g4329 467 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 1 413 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sto8g4329 467 CDD DOPA_deC_like 28 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4329 Sto-Chr8 46126762 46130040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4329 1 467 Calmodulin-binding Proteins AT3G17760 80.942 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4329 K01580 - gmx:100783047 841.262