Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4319 ATGGCGTTCAGGAATCAACCTATTTCTTCCATGAACCCGATGCAGCACCGAGACACAACCGTCAAAGTGCATGTTGTTCGTTTGTGGTGTGTTCCGCCTTACTCCTCCAATACAAGCAAACCTAATCCAAGTGCTGTTGCAATTCAAATGGTTTTATTCTGCTACACATCAGTTTCATATTCGAAGGCCTCTACTACAATTCCTGTAGACATCCGATTACACAATATTTTGGGGAACAGGTGGTCTACAATTGCTGCTAGCTTGCTGGGAAGAACAAAGGACGAGATCAAGAACTATTGGAATACAAACATCAAGAAGAGGTTAATGAAGATGGGGATTGATCTATCAATAAGTTGGCGTTGGGAATAA 369 0.4201 MAFRNQPISSMNPMQHRDTTVKVHVVRLWCVPPYSSNTSKPNPSAVAIQMVLFCYTSVSYSKASTTIPVDIRLHNILGNRWSTIAASLLGRTKDEIKNYWNTNIKKRLMKMGIDLSISWRWE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4319 122 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 71 114 - -
Sto8g4319 122 Pfam Myb-like DNA-binding domain 72 102 IPR001005 -
Sto8g4319 122 Gene3D - 62 118 - -
Sto8g4319 122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 108 IPR017930 -
Sto8g4319 122 SUPERFAMILY Homeodomain-like 72 113 IPR009057 -
Sto8g4319 122 PANTHER TRANSCRIPTION FACTOR MYB106 71 114 - -
Sto8g4319 122 CDD SANT 71 104 IPR001005 -
Sto8g4319 122 ProSiteProfiles Myb-like domain profile. 71 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4319 Sto-Chr8 46015079 46015658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4319 71 114 MYB Transcription Factor Family AT4G05100 72.727 2.88e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto8g4319 Myb_DNA-binding 5.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4319 K09422 - gmx:100820398 76.6405