Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4317 ATGGCTGAGTTGGAAAAGGATGAGGTACCAATGCTGTCGGACACTCATAAACAACCATCTGATGAACCTGTGGATTCCAATTTCCAGAGGCTTGTGTCCAGGACACGAAGTGCATCAATATCTATACCCATGAGCTCCATGGAGCCATATGAGAGAGAAACTAATCTTGTGGGACATACTGGTCCACTGAGGAGTGAGAGAAAAACTCCCTTTGTACAGATGAGTGGTCCACTATATGTTAGCCACAGACCTGGAAACCCCATCCGGCAGAATGCAGGTGTCACAGGGAACAAGGCAGAGGAGAGAATGACAGAAAACTTTTCTTCTTTCCGTGGAAGAGTTgaaaatgattggccaaaaacCTATGCTCACAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTGCTTACGTCAGGGCTACTCAGCAAAGAAATCCAAAGCCTTCCGGTTTATTTGATCCCAAGTTCCATAATGCTCTCTACGGAGATGCCAAGGGTTGTGCTAGGAGATTTCTTTCTTATCTGTCTTCATATGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAACGTTGGAACAAGTGTTTTGTCATTTCTTGCTTGGTGGCAATTTTTGTGGAtccattatttttcttcttgctCTCTGTACTGAAGGAACATAATTGTATCGTCATTAACCCAGCAATGACAACGGTACTTGTTTTATTTAGAAGCATGAATGATTTTGTGTACTTCCTCAACATTCTTCTCCAGTTTAGGTTGGCTTATGTGGCTCCTGAATCCAGGGTGGTTGGTGCTGGCGAGTTAGTTGACCATCCAAAAAAGATTGCTCGCCATTACATGcagagtttttttctttttgacttATTAGTTGTAATTCCACTTCCTCAGATAATGATATTGTTTGTCCTACCAAACTACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTGCGTCTAGCAGTCCTTGTTCAGTATATTCCCAGATTGTGTAGATTTCTGCCTCTGCTAATTGGTCAGTCTCCAAGCTTAATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTATGCTATCTGGCCATGTTGTTGGATCCTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGTTTGCGAGAAGCCTGCCATAGATCGAATTATGAACATTGCATGGCATTGATTGATTGTGGGCAAGGTCGTAGTCATGAAATTGAGCGTCCTGATCCAACATTGGCTCCATGGTCAACAAATGCTAATGCAAGTAGTTGTTTTTCAGAAGATGGTTTTTCTTATGGGATCTATGCTAAAGCTGTTAATCTTACTACAGAACATAATGTGATGAccagatatatatattcattattttggGGATTCCAGCAAATAAGTACTCTGGCTGGTAATCAAGAACCAAGCTATTTTGTTTGGGAAGTCCTTTTTACAATGGGCATCGTAGGACTGGGACTTTTGCTTTTTGCTCTTCTAATTGGAAATATACAAAATTTTCTTCAGGCTCTTGGACGAAGGAGGCTAGAAATGACCCTAAGACGCCGCGATGTTGAGCAATGGATGAGCCACCGGCGCTTACCAGAAAATCTAAGAAGGAAAGTCCGACTTGCCGAACGGTATAATTGGGCTGCAACAAGAGGGGTAAATGAAGAAATGCTTATGGAGAATTTGCCTGAAGATCTTCAGAGAGACATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTACGATTTTTTGAGCTGATGGATGAGCCTATGTTAGAAGCCATTCGTGAAAGATTAAGACAAAAGACATATATCAAAGGAAGCAATATTTTGTATCGTGGTGGTCTAGTAGAGAAAATGGTGTTTGTTGTGCGTGGAAAATTGGAGAGCTTTGGAGAAGATGGAAATAGGGTTACCTTACAGGAAGGTGATGTTTGTGGTGAAGAACTTTTGACATGGTGTCTTGAACATTCTTCAGTGAACAAAGATGGCAGAAAAGTTAGGATTCCAGGACAAAGGTTGCATAGCAACAGGACTGTGTGCTGCTTAACAAATGTGGAGGCATTTTCAATCCGATGTGCAGACCTTGAAGAAGTTACTAGCCTTTTAAcaagattttttaaaaacccACGCGTTCAAGGAGCCATAAGGTATGAATCACCATATTGGAGAAGCCTTGCTGCAACCCGAATTCAGGTTGCATGGAGATACAGAAAGAAACGTCTAAGTCGTGCTGATACCTCGCAGTCAAAGCAATCATTCAGGTCCTAG 2322 0.3997 MAELEKDEVPMLSDTHKQPSDEPVDSNFQRLVSRTRSASISIPMSSMEPYERETNLVGHTGPLRSERKTPFVQMSGPLYVSHRPGNPIRQNAGVTGNKAEERMTENFSSFRGRVENDWPKTYAHKNEHLLRSGQLGMCNDPYCTTCPAYVRATQQRNPKPSGLFDPKFHNALYGDAKGCARRFLSYLSSYVPGVMNPHTKVVQRWNKCFVISCLVAIFVDPLFFFLLSVLKEHNCIVINPAMTTVLVLFRSMNDFVYFLNILLQFRLAYVAPESRVVGAGELVDHPKKIARHYMQSFFLFDLLVVIPLPQIMILFVLPNYLGSSGANYAKNLLRLAVLVQYIPRLCRFLPLLIGQSPSLIFESAWANFFINLLTFMLSGHVVGSCWYLFGLQRVNQCLREACHRSNYEHCMALIDCGQGRSHEIERPDPTLAPWSTNANASSCFSEDGFSYGIYAKAVNLTTEHNVMTRYIYSLFWGFQQISTLAGNQEPSYFVWEVLFTMGIVGLGLLLFALLIGNIQNFLQALGRRRLEMTLRRRDVEQWMSHRRLPENLRRKVRLAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKVRFFELMDEPMLEAIRERLRQKTYIKGSNILYRGGLVEKMVFVVRGKLESFGEDGNRVTLQEGDVCGEELLTWCLEHSSVNKDGRKVRIPGQRLHSNRTVCCLTNVEAFSIRCADLEEVTSLLTRFFKNPRVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSKQSFRS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4317 773 SUPERFAMILY Voltage-gated potassium channels 197 529 - -
Sto8g4317 773 Gene3D Jelly Rolls 598 721 IPR014710 -
Sto8g4317 773 Gene3D Helix hairpin bin 528 592 - -
Sto8g4317 773 SMART cnmp_10 600 735 IPR000595 -
Sto8g4317 773 MobiDBLite consensus disorder prediction 1 23 - -
Sto8g4317 773 SUPERFAMILY cAMP-binding domain-like 528 717 IPR018490 -
Sto8g4317 773 CDD CAP_ED 600 668 IPR000595 -
Sto8g4317 773 ProSiteProfiles cAMP/cGMP binding motif profile. 600 668 IPR000595 -
Sto8g4317 773 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 766 - -
Sto8g4317 773 Gene3D - 207 525 - -
Sto8g4317 773 Pfam Ion transport protein 205 528 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto8g4317 773 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 766 - -
Sto8g4317 773 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4317 Sto-Chr8 45979129 45992376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4317 5 678 Ion Channels AT3G17700 63.158 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4317 K05391 - tcc:18587138 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4317 8 45979129 45992376 Sto8g4317 8 45979129 45992376 ECH