Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4284 CTGTTTTTTCCAGGTTTATCTTTTCGTACCACTGAAGAAAGCTTGCGAAATGCCTTTATGAATTTTGGTCAACTTGTGGAagTCAACCTGGTGATGGATAAAATAGCAAATAGACCAAGAGGCTTTGCATTTCTTCGTTATGCAACTGAAGAGGAATCCCGGAAGGCTATTGAGGGAATGCATGGAAAGTTCTTAGATGGTAGGGTCATATTCGTGGAAGTTGCCAAACCAAGATCTGAGCTACGCCAAAGGGTTGAGCAAAATCCTAGATACTAG 276 0.413 LFFPGLSFRTTEESLRNAFMNFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRKAIEGMHGKFLDGRVIFVEVAKPRSELRQRVEQNPRY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4284 91 PANTHER TRANSFORMER-2-RELATED 1 88 - -
Sto8g4284 91 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 77 IPR000504 GO:0003723
Sto8g4284 91 PANTHER RNA-BINDING PROTEIN 1 1 88 - -
Sto8g4284 91 SUPERFAMILY RNA-binding domain, RBD 1 87 IPR035979 GO:0003676
Sto8g4284 91 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 70 IPR000504 GO:0003723
Sto8g4284 91 SMART rrm1_1 1 73 IPR000504 GO:0003723
Sto8g4284 91 Gene3D - 1 91 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4284 Sto-Chr8 45677644 45680329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4284 1 88 Eukaryotic Initiation Factors Gene Family AT4G34110 29.348 2.55e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4284 - - pavi:110746078 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4284 8 45677644 45680329 Sto8g4284 8 45677644 45680329 ECH