Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4264 atgtcacggGTCGGGTTGCCGCCGGGTTTTCGGTTTCATCCGACCGACGAAGAGCTTGTCAATTATTATCTCAAAAGGAAGATCCATGGCCAAGAAATTGAACTTGACATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAACTTGCAGGGAAAAATGTTGAAATGGCTGATTTTGGTGGGACATTTTTTCGGgattgtaataataataataatgatgaggTAGAGAAGTCATTTCTGCCAAGTAGAGACCCAGAGTGGTACTTCTTCGGACCAAGAGACAGGAAATATCCGAATGGGTTCAGAACAAACAGAGCCACTCGAGCTGGGTATTGGAAGTCCACTGGGAAAGACAGAAGGGTGAGTTACCAGAATAGAGCCATTGGGATGAAGAAAACTCTTGTTTACTACAGAGGTAGGGCCCCTCAAGGTATCAGAACGGACTGGGTCATGCATGAGTATCGCCTCGACGACAAAGAATGCGAGGACACTTCCGGGTTACAgGATACATATGCTTTGTGTCGTGTGTTCAAGAAAAATGGGATCTGCTCTGAAATTGAAGAGCAAGCAGCAGGGCAGTGTAGTTTGGCACTAATTGAGAGCTCACAAACCATAAATATGAATAATGAAAGTGAAACTTTGTCTCCAGAGGTAGGAGCAGCATCTTCTTCTtgcttggaagaagaagaagacaaagatGATTCATGGATGCAATTCATTACAGATGATGCATGGTATCCTTCAACTGCACCACCATCCATGGCTGGTTGTGAAGAACTCTCTCATCATCTTACTTTCACAAATTAA 813 0.4084 MSRVGLPPGFRFHPTDEELVNYYLKRKIHGQEIELDIIPEVDLYKCEPWELAGKNVEMADFGGTFFRDCNNNNNDEVEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSYQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTSGLQDTYALCRVFKKNGICSEIEEQAAGQCSLALIESSQTINMNNESETLSPEVGAASSSCLEEEEDKDDSWMQFITDDAWYPSTAPPSMAGCEELSHHLTFTN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4264 270 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 77 270 - -
Sto8g4264 270 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 55 - -
Sto8g4264 270 SUPERFAMILY NAC domain 3 181 IPR036093 GO:0003677|GO:0006355
Sto8g4264 270 Pfam No apical meristem (NAM) protein 7 158 IPR003441 GO:0003677|GO:0006355
Sto8g4264 270 Gene3D NAC domain 15 184 IPR036093 GO:0003677|GO:0006355
Sto8g4264 270 ProSiteProfiles NAC domain profile. 6 181 IPR003441 GO:0003677|GO:0006355
Sto8g4264 270 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 55 - -
Sto8g4264 270 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 77 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4264 Sto-Chr8 45398381 45404720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4264 1 257 NAC Transcription Factor Family AT3G17730 69.434 2.82e-127 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g4264 NAM 4.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4264 - - gmx:100784495 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g4264 8 45398381 45404720 Sto8g4264 8 45398381 45404720 ECH