Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4256 CTGGCCGCTCCGTCGAGTTCCTACTCCTTTTCACTTCCCAAATTGCTCAAGGTCTCCCGAATCCTGtcggttcttcttcttctgcccAGACTCTCCGATCCAAACGGAGAAGAattcccaaaaccccaaaccctacggGAGATAAACCCTAATGGTAATTGTCTAAGATTAAGTGCTCGCAGACCCCAATCCACAGTCTCCGATAAGAAAATTAGCCGGTCCAATTTGGGCTCATTGAATATCGATGGCATTCTCAACGATGTTTACGAGTCAGGGCCATCCACGGAGTCCACTCTTCTGGACGCCCAGATAACCTTAATTGATACGCCGGCTAATACCGCAGACGGAAATCCAAATGGTGGGTCCTTGAATGTTCCGAAAACTATGGATGATGTCTGGAAGGATATGATTTCCGGTGATAGGAGAGAGTGTAAGGTTGAGGCAATGGACGAAATGATGACATTGGAGGATTTTCTGGCCAAGTCTGAAGCTGTGGAGGACGATGATGACGTGAAGATGCCTGTGCTTCCCAGTCAGCGGTTGAGCGGTGGCGTGTTTACGTTTGATCCTATTCCACCAAGCTCGTTCCAAGCGCTGGATAAAGTTGAAGGCTCGGTTGTTGGGTTCGGGAATGGAGTGGAGGTGAGTGGAGGGAGGAATAAAAGAGGCCGCACTGTCTTAGAGCCGGTGGATAAGGCTACCCAGCAGAGGCAAAGGAGAATGATAAAAAACAGAGAATCCGCAGCAAGGTCTAGGGAACGGAAGCAGGCTTACCAAGTTGAATTAGAGTCAATAGCGGTGAGACTAGAGGAGGAAAATGAGCAGCTCATGAAGGAAAAGGCTGAGAGGACCAAGAAAAGGTACAAGCAGCTCATGGAAAAAGTCATTCCCATTGTGGAGAAGCAAAGGCAATCACGTACACTTCGTAGGttCTTGAGGGCAAAGGTTCTGGTTGATCCATCAAAACCATTGTTTATGGGTGCCTTTATACCTTTAAGCAATAGCCAGAAGGTTCGAATTTCTTGCATGCCTGAAAGAACTTTCAGGGTGTGTGAACAATGTGGGAGGATTGGTCATCTCCCAAATGTTGTAACTGGAGTGTGTTTACAACTTATGCAGAGCTCCATCAGCAAAGGACTGATATGTTGGTTAAGTATGGTGTTGATTTCTGGATACAACCAAACTTTGTTCTATTTCAATGCCCAATATGGAAGTTGCAGGAGTGGCTTTTTAGGAGGACGACAAGAGTATTCCCAGGAGTCTGATGATGGATATCTTCCATTTATGATGAAAGTCATTGGAGGTACCATTGTAGAATATGTCATCACCGTCGGTCGGAAATGCTGA 1347 0.4477 LAAPSSSYSFSLPKLLKVSRILSVLLLLPRLSDPNGEEFPKPQTLREINPNGNCLRLSARRPQSTVSDKKISRSNLGSLNIDGILNDVYESGPSTESTLLDAQITLIDTPANTADGNPNGGSLNVPKTMDDVWKDMISGDRRECKVEAMDEMMTLEDFLAKSEAVEDDDDVKMPVLPSQRLSGGVFTFDPIPPSSFQALDKVEGSVVGFGNGVEVSGGRNKRGRTVLEPVDKATQQRQRRMIKNRESAARSRERKQAYQVELESIAVRLEEENEQLMKEKAERTKKRYKQLMEKVIPIVEKQRQSRTLRRFLRAKVLVDPSKPLFMGAFIPLSNSQKVRISCMPERTFRVCEQCGRIGHLPNVVTGVCLQLMQSSISKGLICWLSMVLISGYNQTLFYFNAQYGSCRSGFLGGRQEYSQESDDGYLPFMMKVIGGTIVEYVITVGRKC 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4256 448 Coils Coil 255 294 - -
Sto8g4256 448 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 234 279 IPR004827 GO:0003700|GO:0006355
Sto8g4256 448 SMART brlzneu 232 297 IPR004827 GO:0003700|GO:0006355
Sto8g4256 448 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 239 254 IPR004827 GO:0003700|GO:0006355
Sto8g4256 448 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 70 311 IPR043452 GO:0003700|GO:0045893
Sto8g4256 448 Pfam bZIP transcription factor 234 294 IPR004827 GO:0003700|GO:0006355
Sto8g4256 448 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 70 311 - -
Sto8g4256 448 Gene3D - 234 293 - -
Sto8g4256 448 CDD bZIP_plant_BZIP46 236 282 - -
Sto8g4256 448 SUPERFAMILY Leucine zipper domain 236 285 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4256 Sto-Chr8 45296834 45302373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4256 78 311 bZIP Transcription Factor Family AT5G44080 49.615 4.76e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto8g4256 bZIP_1 3.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4256 K14432 - zju:107421670 328.176