LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g4244	ATGGAAAAGAATAAGGCATATCTAGCAATGCTCTTCATACAATTTGTGTATGCTGGAATGGCTTTGCTTTCTAAAGCTGCAATTTCCAAGGGAATGAACCCTTATGTTTTTGTTGTTTATCGCCAAGTTTTTGCATCAATTGCCTTGTCTCCATTTGCATTCTTTGACAGGTTGACATTAAGTTCAACCCTTTACTATGTTGCAATGAACAATACTTCTGCAACATTTGCGGCTGCCTCCACAAACACCATCCCAGCCATTACTTTTATCATGGCTGTTATAATAAGgGTCGAAAGCTTTTCCATAAAACATGTCCATGGATTGGCCAAGATTTTGGGTTCCATTGTGAGCCTTTGTGGGGCAATAATATTTGCTTTAGTCAAAGGGCATCCCTTAGATTTCATGAATCACTCTTCGTCATCACAAACAGATCAGGTTCACTCCAAAGGGGATTTTATTAAAGGACCTATTATGATGCTCTCGGCCAATATTGCTTGGTCTTTGTGGCTTATATTGCAAGGTTTCATTGTAAAGCAATATCCAGCAAAGTTTCGCCTCACTACTCTACAATGCTTCTTTAGCTGCATACAGTCAGCCATTTTTGCAGTGGCAATGGACAGAAATCCTTCAACTTGGAAGCTTGGATGGGACATTCATCTTCTTTCTGTGGCCTACTGTGGTGTAATTGTTACAGGAGTTTGTTATTGGGTGCAAGTATGCAGTATAGAGGAGAAAGGCCCAGTTTTTACAGCAATGTTTACCCCTCTTGCTCTTATCATCACTGCTATATGCTCAGCACTTCTGTGGAAGGAAACACTTTATTGGGGAAGTGTTGGGGGTACTATTTTGCTGGTGGTTGGACTCTACAGTGTTTTGTGGGGGAAGAACAGAGAGAGTTTAGAAGAGAAAAGGCATGAAAAGGGAGAAGCAATATTAGAGGAAACCAGATTGGAGTGCATTATAAAGCACTAA	972	0.4043	MEKNKAYLAMLFIQFVYAGMALLSKAAISKGMNPYVFVVYRQVFASIALSPFAFFDRLTLSSTLYYVAMNNTSATFAAASTNTIPAITFIMAVIIRVESFSIKHVHGLAKILGSIVSLCGAIIFALVKGHPLDFMNHSSSSQTDQVHSKGDFIKGPIMMLSANIAWSLWLILQGFIVKQYPAKFRLTTLQCFFSCIQSAIFAVAMDRNPSTWKLGWDIHLLSVAYCGVIVTGVCYWVQVCSIEEKGPVFTAMFTPLALIITAICSALLWKETLYWGSVGGTILLVVGLYSVLWGKNRESLEEKRHEKGEAILEETRLECIIKH	323

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g4244	323	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	40	118	-	-
	Sto8g4244	323	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	191	297	-	-
	Sto8g4244	323	Pfam	EamA-like transporter family	154	292	IPR000620	GO:0016020\|GO:0016021
	Sto8g4244	323	Pfam	EamA-like transporter family	60	116	IPR000620	GO:0016020\|GO:0016021
	Sto8g4244	323	PANTHER	WAT1-RELATED PROTEIN	4	55	IPR030184	GO:0016021\|GO:0022857
	Sto8g4244	323	PANTHER	WAT1-RELATED PROTEIN	58	300	IPR030184	GO:0016021\|GO:0022857
	Sto8g4244	323	PANTHER	WAT1-RELATED PROTEIN	4	55	-	-
	Sto8g4244	323	PANTHER	WAT1-RELATED PROTEIN	58	300	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g4244	Sto-Chr8	45165164	45172663	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g4244	1	323	Nodulin-like Gene Family	AT1G44800	35.694	4.26e-74	231

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g4244	-		-	gsj:114390241	464.922

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