Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4146 ATGTCTGAGCTCCAAGAAAGAGAGCGAGAAAGGGAGCTAACGGTGGAAGAACAAGAAAATCTGAAACGGAGCGTAAAGAAGATTAAGATGCACGACGGATCCACCACTGTGGATCCTCCCGAAAGCTCTGAACATGAAGGTCATTCCCCGAAACCAATGGAGGAAAGCCCGATAGCTGAATCGAAATTGATGGATGAAATCCCTAACCTTACTCTTGATAAAGGCGATCCACGGTCAAAGCCAGTTAGGCGTTCACTATGGGGGGCAAATCCTTTAAACCCACAATCTTATAAAGAAAAGCTTATGGGAATCAATGGGCGTGATAAGGACATCTTTTTCAATGAGGAAGATATCTGTAAAGAGGAACCATCAGATGATGAGCAAGAAGTTGATTTACAAGGGAAGGCTACACAACCAGCCACATCACTGAAAACCACGAATTCTGGGTCAAGGTTTGAAGCAATTAATGATGAAGCAATAAGAGACATGGACATTGATAAGGATTTAGAGAATACAGAGGAACAGCAAATCATTGTTAACTTAGCTGCGGAAGAAACAAAGATGGCAAAGGATCTTGCTCAACAAGAGTCAAGGCAGAAACCGgtgaaaaataaacaaaaaaaaggggACATCCAGAGTATAGGAAGCAAAAAACAGATTCAAGTAAACCAGGCTCCCATCCATCCTAAGAAGACAGGTAGAATCCCTACGGAAAAGGGGAAGGACCACACTTTGGTAACATCTATTGGAACCAAGAATTTGACTACCCAAGGGAGTAAAACCCCCATCAAGCTAACTGATAGTCACCCGAAGGCTCCCACTAAACACCCAACTACTGCACCAAAAGGTTCAGTGGACAAGGATGCAGAGGTGGAGGAACAACTTCGTGCGATACGTCTTATGGAGAAACAAGAAAGGGAAGCAGGGACATCCCTTGGCGCTCTCGGAGCTACCCATGTGTATTCTAACCTCTTGTGGCTCGTCCCTCTTTTATTGTACATCATGGCTCGTCCTCATGGTTCCAAGAATAAGCCGAAGTCACAACCACAAATACTTTTTGCCAACAATCCATCTTTGAAAGACTCCATTGACATCATGGGTCTCCCTCCCAAAAACTCACCATCTCTTTCCTCCGATGCCGACGACCACCTAAAACCAAAGAAGCAGCGAGGTAGGCCAAAAGGTTCCAAGAGCAAGCCGAAGTCACACCCACAAATATTTTCTGCCAGCAATCCATCTTTGAAAGACTCCATCGACGTCATCGACGTCCCTTCCGGCGCTGGCATAATATCGTGGTTGTGTTGGTACTCATACAGTCGACAAAAGAACATCACTGTGTTATCTGCCTTTGGATTGGTCTCCCAACTCTctattcttcctcttcttactaaTTATCCACACATCATATCCGTACCTGGATCCGTACCCGTGCTGTCTCTCTCCGGTTCTATTCCGCTCGAGATCACATCATCGCCGTCGTTTCATTCGTTAACTATTTGTGTTCCGGGGTGTGAAGGACAAATAGTTTATGGAGTCATTGGAGGAAGTGTTGTAGCTACAAGCATTGTGACGATAGTGATAGTGGCCTAA 1590 0.4403 MSELQERERERELTVEEQENLKRSVKKIKMHDGSTTVDPPESSEHEGHSPKPMEESPIAESKLMDEIPNLTLDKGDPRSKPVRRSLWGANPLNPQSYKEKLMGINGRDKDIFFNEEDICKEEPSDDEQEVDLQGKATQPATSLKTTNSGSRFEAINDEAIRDMDIDKDLENTEEQQIIVNLAAEETKMAKDLAQQESRQKPVKNKQKKGDIQSIGSKKQIQVNQAPIHPKKTGRIPTEKGKDHTLVTSIGTKNLTTQGSKTPIKLTDSHPKAPTKHPTTAPKGSVDKDAEVEEQLRAIRLMEKQEREAGTSLGALGATHVYSNLLWLVPLLLYIMARPHGSKNKPKSQPQILFANNPSLKDSIDIMGLPPKNSPSLSSDADDHLKPKKQRGRPKGSKSKPKSHPQIFSASNPSLKDSIDVIDVPSGAGIISWLCWYSYSRQKNITVLSAFGLVSQLSILPLLTNYPHIISVPGSVPVLSLSGSIPLEITSSPSFHSLTICVPGCEGQIVYGVIGGSVVATSIVTIVIVA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4146 529 ProSiteProfiles PPC domain profile profile. 412 529 IPR005175 -
Sto8g4146 529 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 377 527 IPR014476 GO:0003680
Sto8g4146 529 MobiDBLite consensus disorder prediction 121 155 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 190 221 - -
Sto8g4146 529 Coils Coil 1 24 - -
Sto8g4146 529 SUPERFAMILY AF0104/ALDC/Ptd012-like 421 528 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 363 411 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 1 96 - -
Sto8g4146 529 CDD DUF296 420 527 IPR005175 -
Sto8g4146 529 Pfam Plants and Prokaryotes Conserved (PCC) domain 420 528 IPR005175 -
Sto8g4146 529 MobiDBLite consensus disorder prediction 134 153 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 1 81 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 253 289 - -
Sto8g4146 529 MobiDBLite consensus disorder prediction 190 212 - -
Sto8g4146 529 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 377 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4146 Sto-Chr8 44172753 44178096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4146 387 519 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 34.752 8.67e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4146 - K10386 aprc:113857467 67.0106