Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4074 ATGTCTGATGGGGAAATCCTACAAGCTGCCCCTTATCACCATTTATTGTCCTCAAGCCAGGAATTTCAAGACCTTGTCAACGCTCACAAGGAGACGGCTGGTTCTGAAAGGCTTCCAGATGCTACTTCTACTAAGACACGTGCGAATTCTGCTAGAGAGATTAGTAAATCCTATGTAGAGGAACAATTTAAATCATCAAAAGGCGATCAGTTAATTAAGcaggaagaaagagaaataggAGACATGGGGGTTAAGCCTTACTTGCAGTATCTGAATCAGAATAAGGGTTATCTATACTTCTCAATTGCTGCCCTTTGCCACCTTACATTTGTGGTTTGTCAGGTGTCACAGAACTCATGGATGGCTGCTAATGTCGAAAACCCCCGTGTTAGCACATTGCGATTAATTGTGGTGTACTTGTTGATTGGAGTTACATCAACAGTTTTCTTGTTGGTGAGAAGTCTTGCAGTAGTTGCTTTGGGTGTTCAATCCTCAAAATCTTTGTTTTCACAGCTACTGAACTCCCTTTTTCGTGCCCCGATGTCTTTCTATGACTCCACACCTTTAGGAAGGATACTTACTAGGGTCACATCTGATCTGAGCATTGTTGATCTTGATGTTCCATTTGCCCTCATGTTCACCATTGGAGCCACTATGAATTGTTATGCTAATCTTACAGTTTTAGCCGTTGTTACTTGGCAAGTCTTGTTTGTCTCTATACCCATGGTTTATATTGCAATTCGCCTCCAGAGATACTACTTTGCCTCTGCAAAAGAACTGATGCGGATGAATGGCACAACAAGGTCTTTTGTAGCAAATCATCTAGCTGAATCTATTGCTGGAGCTGTGTCAATAAGGGCTTTCGAGGAGGAAGATCGTTTCTTCACCAAGAACCTTGATTTAATTGATGTCAATGCTGCTCCTTTCTtccatacttttgcagcaaatgaGTGGTTGATTCAACGTTTAGAAGCAGTGAGTGCAGTTGTTCTTGCTTCTGCAGCACTTTGCATGGTGGTGCTTCCACAAGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTTTCTTATGGCCTTTCTTTAAACGCCTCGCttgtattttcaattcaaaaccaGTGCACTCTAGCAAATTACATAATATCAGTAGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCCAGAAGTGATAGAAGGTAATCGCCCCCCTGTGAATTGGCCAGTTAGGGGAAAAGTAGAAATCAATGATTTGCAGATAAGATATAGGCCCGATGCACCCCTTGTACTTCGAGGGATCACGTGCACATTTGAAGGAGGGCACAAGATTGGCATTGTTGGTAGAACTGGCAGTGGGAAGACCACTCTCATAGGTGCTTTGTTTCGCCTGGTGGAACCAGTGGGTGGGAAGATAATAGTTGATGATATAGACATTTGTTCTATTGGACTTCGGGACTTGAGGTCAAGAAGATGTGTAATTGAATATATTTTCCCTCTTAAGGTTCTTGGAAAGTGCCAATTGCGAGAAGCTGTCCAAGAGAAAGAAGGAAGCTTAGACTCTTCAGTTGTGGAAGATGGTTCAAACTGGAGCATGGGACAACGACAATTATTCTGTTTGGGGCGTGTTCTTCTGAGGAGAAGTCGAATTTTAGTACTTGACGAAGCAACTGCATCTATTGATAATGCCACTGATTTAATTCTGCAGAAAACCATTAGGAGTGAGTTTGCAGATTGTACTGTGATCACTGTGGCTCATAGGATACCAACAGTGATGGATTGCACCAAGGTTCTCTCCATTAGTGACGAAGATGAGGTGGCTTTGGTTAGTGTGAACAACTCCGGAAACTATGAAGAAGATTGGATCATAGACTCAGGGTGTTCCAATCATATGATGAGTGATAGAGGCAAGCTTTCGGCATTGGAAGAGTATAAAGGAGGTCAAGTTGTGGTAACTTCTAAAAACTCGAGATTGCCAATAGCCCATGTTGGCAGTACTACTGTTGTCTCTGATATAGTTCGAAGCAGCTATCACACATTGAAGGTGATGATGAAAAAGCGGATGCTTAAAGGGTTGTCTCAATTGGATGTACGAGATAACGTCGTGTGTGCTAGGTGCCAATACGGTAAAGCGCACCAATTACCGTTTGAAGAATCCAATTTTAGAGCGAAGGCACCGTTAGAGCTTGTCACTTAG 2196 0.4162 MSDGEILQAAPYHHLLSSSQEFQDLVNAHKETAGSERLPDATSTKTRANSAREISKSYVEEQFKSSKGDQLIKQEEREIGDMGVKPYLQYLNQNKGYLYFSIAALCHLTFVVCQVSQNSWMAANVENPRVSTLRLIVVYLLIGVTSTVFLLVRSLAVVALGVQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILTRVTSDLSIVDLDVPFALMFTIGATMNCYANLTVLAVVTWQVLFVSIPMVYIAIRLQRYYFASAKELMRMNGTTRSFVANHLAESIAGAVSIRAFEEEDRFFTKNLDLIDVNAAPFFHTFAANEWLIQRLEAVSAVVLASAALCMVVLPQGTFTSGFIGMALSYGLSLNASLVFSIQNQCTLANYIISVERLNQYMHIPSEAPEVIEGNRPPVNWPVRGKVEINDLQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPVGGKIIVDDIDICSIGLRDLRSRRCVIEYIFPLKVLGKCQLREAVQEKEGSLDSSVVEDGSNWSMGQRQLFCLGRVLLRRSRILVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVLSISDEDEVALVSVNNSGNYEEDWIIDSGCSNHMMSDRGKLSALEEYKGGQVVVTSKNSRLPIAHVGSTTVVSDIVRSSYHTLKVMMKKRMLKGLSQLDVRDNVVCARCQYGKAHQLPFEESNFRAKAPLELVT 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4074 731 CDD ABCC_MRP_domain2 412 602 - -
Sto8g4074 731 CDD ABC_6TM_ABCC_D2 100 389 IPR044726 GO:0140359
Sto8g4074 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 602 IPR027417 -
Sto8g4074 731 MobiDBLite consensus disorder prediction 37 51 - -
Sto8g4074 731 MobiDBLite consensus disorder prediction 31 51 - -
Sto8g4074 731 SMART AAA_5 440 602 IPR003593 -
Sto8g4074 731 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1 606 - -
Sto8g4074 731 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 606 - -
Sto8g4074 731 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 135 377 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g4074 731 Pfam ABC transporter 431 558 IPR003439 GO:0005524
Sto8g4074 731 Gene3D ABC transporter type 1, transmembrane domain 61 395 IPR036640 GO:0005524|GO:0016021
Sto8g4074 731 Gene3D - 500 616 IPR027417 -
Sto8g4074 731 Gene3D - 398 499 IPR027417 -
Sto8g4074 731 Pfam ABC transporter transmembrane region 100 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g4074 731 SUPERFAMILY ABC transporter transmembrane region 86 394 IPR036640 GO:0005524|GO:0016021
Sto8g4074 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 414 644 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4074 Sto-Chr8 43371931 43381712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4074 410 640 Calmodulin-binding Proteins AT2G36910 26.437 2.92e-17 84.7