Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4073 ATGGTCGAAACACTGGAAACCTTCTATATCCCACTGAGTCGGTCACTATCATCATCGAAGAGATTTCATGGCCTTGTCCAGGCTCAAAGGTTTTCGAATTTGCAGGTAGTTTCTGCCATAACCAATGGCTGTCTTGGGATAGTCCATTTGTGCTTAGGCTTCTGGGTTTTAGAGGAGAAGTTGAGGAAAACCGACACTGCTTTTCCTATCAATTGGTGGTTTCTGGAGTTTTCTCAGGGGTTCACATGGTTGTTGGTGGGTTTAACAGTAAGTCTTAGGCTAAAAGAACTTTCAAAACCATGCTTGAGGCTATTCTCTATTCTTGTCCTCTTAATTTCTGGTATTTTCTGTGCTTTCTCCATTTCTTATGTCATTAGTGGCAGAAGAGTGTCTCTTAAGGTAGCTTTAGATGTTCTTTCTTTCCTAGGAGCAATATTGCTGCTCATATGCTCCTATAAGGGATATATCAATTATGAAGAGACTAACAATAATGCTGATGAAAGCCTTTATGCCCCATTAAATGGTGAGTCCAATGACCCTGGTAAGACTACTTATCTTAACCACGTGACCCCGTTTTCTAATGCTGGATTCTTCAGCAAAATGTCATTTTGGTGGTTGAATCCGTTGATGGAAAAGGGTAAGGAGAAAACACTTGAGGATGAAGATATCCCCAAGTTGCGAGATGCAGATAAAGCTGGAAGTTGCTATTTGGTGTTTCTTGATCAATTGAACGCACAAAAACAGAAAGATCCATCATTGCAGCCCTCAGTTTTGCGGACAATAATTCTGTGCCATTGGAGAGAGATTTTCATATCTGGGTTTTTCGCATTGCTAAAGGTAGTCACTTTGTCTGCGGGTCCACTACTCCTTAATTCCTTCATATTGGTCGCTGAGGGTAAAGAGAGTTTCAAATACGAAGGTTATGTATTGGCAGTGTCCCTTTTCTTTACCAAGATCATAGAATCACTATCACAAAGGCAGTGGTACTTCCGTAGTAGACTCATTGGTCTAAAAGTTAGGTCTTTGCTAACTGCAGCCATATACAAGAAGCAACTTAGGCTTTCCAATGCTTCAAAGTTGATACATTCTAGTGGGGAGATTATGAATTATGTGACTGTAGATGCTTATAGAATTGGAGAATTCCCATACTGGTTTCACCAAACTTGGACCACAAGCGTTCAACTATGCATTGCATTAGTAATTCTTTTCCACGCTGTCGGCCTAGCAACAATTGCTTCCTTGGTGGTCATAATTCTCACTGTGCTCTGCAATACCCCACTTGCCAAGTTACAACACAAGTTTCAGAGCAAACTCATGGTGGCACAAGACGAGAGGATGAAGGCAAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTCAAGCTTTACGCGTGGGAAACGCATTTCAAGAATGCTATTGAAAGCTTGAGGAAGGTGGAGCTCAAGTGGTTATCTGCAGTGCAGTTAAGAAAGGCGTATAATACCTTTCTCTTTTGGTCATCTCCTGTTTTGGTCTCTGCTGCTTCGTTTGGAGCTTGTTACTTCCTGGAAGTTCCTCTACATGCAAATAACGTTTTCACCTTTGTGGCAACTTTACGCCTTGTTCAAGACCCAATTAGGACTATCCCTGATGTTATTGGGGTGGTGATTCAAGCGAAAGTAGCATTTTCGCGAATTGTAAAGTTCCTTGAGGCACCGGAGTTGGAGAATAGTGATGCAAAAGTGAGAAAGGTGTGTTTGAGTGGTGGTCCAAGTGGTTCCATTAATATCAAGTTGGCTGACTTTTCGTGGGAAGATAATGTATCAAAGCCCACTCTGAGAAACATAAATCTGGAGATTAAAGCAGGGCAAAAGGTGGCTATTTGTGGAGAAGTGGGCTCTGGCAAATCAACTTTATTAGCTGCAATTCTTGGAGAAGTTCCCAATACTTGTGGATCTATTGAAGTTCATGGGAAATTTGCTTATGTTTCTCAATCAGCATGGATACAGACAGGTACAATACGGGAGAATATATTGTTCGGATCACCTATGGATGCCCAAAGGTTGCAAGAAACACTTGAAAGGTCATCCTTAGTGAAGGATCTTGAGTTGTTTCCCCATGGTGATCTTACTGAAATAGGGGAGAGAGGAGTCAACCTTAGTGGAGGTCAGAAGCAGAGGATTCAACTTGCTCGTGCGCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCCTTCAGTGCAGTTGATGCACACACCGCTACAAATTTGTTTAATGTAAAGTTTCCTTTAATTTCTCTACATATTGCATTTGTATCTTCTGTGTGTGATGTTCTTTACTCACAGATTGTTTCTAATTTCGCAGGAATATGTCATGGAGGCACTTGCGGGAAAGACAGTCCTACTTGTGACTCATCAAGTTGA 2403 0.4145 MVETLETFYIPLSRSLSSSKRFHGLVQAQRFSNLQVVSAITNGCLGIVHLCLGFWVLEEKLRKTDTAFPINWWFLEFSQGFTWLLVGLTVSLRLKELSKPCLRLFSILVLLISGIFCAFSISYVISGRRVSLKVALDVLSFLGAILLLICSYKGYINYEETNNNADESLYAPLNGESNDPGKTTYLNHVTPFSNAGFFSKMSFWWLNPLMEKGKEKTLEDEDIPKLRDADKAGSCYLVFLDQLNAQKQKDPSLQPSVLRTIILCHWREIFISGFFALLKVVTLSAGPLLLNSFILVAEGKESFKYEGYVLAVSLFFTKIIESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQLRLSNASKLIHSSGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCIALVILFHAVGLATIASLVVIILTVLCNTPLAKLQHKFQSKLMVAQDERMKASSEALVNMKVLKLYAWETHFKNAIESLRKVELKWLSAVQLRKAYNTFLFWSSPVLVSAASFGACYFLEVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFSRIVKFLEAPELENSDAKVRKVCLSGGPSGSINIKLADFSWEDNVSKPTLRNINLEIKAGQKVAICGEVGSGKSTLLAAILGEVPNTCGSIEVHGKFAYVSQSAWIQTGTIRENILFGSPMDAQRLQETLERSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNVKFPLISLHIAFVSSVCDVLYSQIVSNFAGICHGGTCGKDSPTCDSSS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4073 800 SUPERFAMILY ABC transporter transmembrane region 258 563 IPR036640 GO:0005524|GO:0016021
Sto8g4073 800 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 270 550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g4073 800 ProSitePatterns ABC transporters family signature. 712 726 IPR017871 GO:0005524
Sto8g4073 800 Gene3D - 568 773 IPR027417 -
Sto8g4073 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 584 754 IPR027417 -
Sto8g4073 800 Pfam ABC transporter 605 739 IPR003439 GO:0005524
Sto8g4073 800 Gene3D ABC transporter type 1, transmembrane domain 257 567 IPR036640 GO:0005524|GO:0016021
Sto8g4073 800 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 36 752 - -
Sto8g4073 800 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 36 752 - -
Sto8g4073 800 CDD ABC_6TM_ABCC_D1 271 558 IPR044746 GO:0140359
Sto8g4073 800 Pfam ABC transporter transmembrane region 269 535 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g4073 800 CDD ABCC_MRP_domain1 587 752 - -
Sto8g4073 800 SMART AAA_5 614 790 IPR003593 -
Sto8g4073 800 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 589 800 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4073 Sto-Chr8 43366598 43371237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4073 584 746 Calmodulin-binding Proteins AT2G36910 35.000 5.09e-21 97.1