Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3466 ATGACCTGCTTCGCTTGGAAGACCACCCTTTTGATATCAACAACTTCAATTTCACTTCTCCACTTTCCAACACCCAAAATGAGGACATCGTCGCCCCCTACTGGCCATCTCCGGGGCTTTTCTTTGGACTCTGATTTCTACAACATCGGATTGGGATTGATCGGCGACGTCAATGGTGTAGACGGAGAGAACCTTGGAAGGAATGGGGAGTGGCCAGTAGTACATCATCGGCAGAACATTTCCATGGATGGGTTGACCAACGTCTCATCAGTTGAGGCTGACTCATCCATGGGGAGTGAAAGGAAGAAGGTCGTGACCCCCCATGAGCTCGCGGAATTAGCTCTCATTGATCCTTCGAGATATAGAAAGATTCTTGGTAATAGGCAATTTGTGCCTCGATCAAAGGAGAGGAAAAACCGTTATGCAAGTGGACTGGAAATAAATGTACAGATGCTTAAGACGAAATCAAATAACCTCTCGATCGAGCTTACAATAattcagAGGAAAACTACAGAGTTAAGTGCAGAGAATAAGTTGCTTAAAGTGCAATTGGAGGCTACGCTTCAACAAGCCCGATTTAGAGATGGCTGTTCTTTGAATGTGGCTTATGTCCTCACTACTACCAAGCCtcaagaaggagaggaagaaaCCATTGATGCAATCAGAGAGAGACAAAAGTGGGAGAATGATGACTATATCTGCACTGGGCATATCTTCAACGGTCTGTGTGATGCTCTCTTTGATGTTTATCAAGATTCAACCTCTGCAAAGGATCTTTGGAACAAACTTGAGGCAAGGTACATGCAAAAGGATGCAACAAGTAAGAAATTTCTTGTTACCcgctttaataattataagatgATTAATGGAAAGTCTATCATGGATCAAATGCATGAAattgaacatattttaaataattttaaacaacatGACATGCATATGGATGAGTCCATTATTGTCTCCTCAATCATAGACAAACTTCCTTCTTCATGGAAAGATTTGAAAAAGAAACTCAAACATAAAAAGGAAGATATTTCTCTTGAGCAATTGGGAAATCATCTTCGTTTAGAAGAGGAATATAGAAAGCAAGATGCTGAAAAAGAAACCAATGTTCAAGAGAAGGTACATATGGTGGAGGAAGGACAGTCCAATAGAACCTCAAAGAAAAGAGGGAAGGATAAAGACAAGTCTCAAGCACATGATGGtcataaaaacaagaaaatgaaagCCCGCATTAGAAACACCTTAGTGGATGGTTGTGTACACCTGAATTGGTCCGGCCCCGAAAAAGGGCTTCCACAGGATAAGGGTCGCGACCTAGTTTACCTGGGTCGCGACCCCGAAGGACGAGGAGGCCAAGGTCACGACCTAAACCTAGGCTTAATAGAGGAAAGGGACCTAAAGGCAGATGTGAAAAGAAATCCCTTAGACTCTTGTAAAGCACTTAGATTTGGTAGCTCTAACAGGAAGGGTTTCGACCTAAATTCCATAGGTCATGACCTGTGTGCCCTGATCCCAACATCCTTTGTTCTCCATCTGTTTGTGACTCTGGGAGCGGGTTTTGGTTGCAAACTTAGTGCCATAATCCCCATATTCTTTATGCTGCTTTTTGTTACGATTTCTTGGTTGACATGTCGCAACCCTGACTTGTCCAAGTTGCGACCCCCTGTGCTGCCATCACTTCTGACAGAGGCAAGAATGTGA 1704 0.4137 MTCFAWKTTLLISTTSISLLHFPTPKMRTSSPPTGHLRGFSLDSDFYNIGLGLIGDVNGVDGENLGRNGEWPVVHHRQNISMDGLTNVSSVEADSSMGSERKKVVTPHELAELALIDPSRYRKILGNRQFVPRSKERKNRYASGLEINVQMLKTKSNNLSIELTIIQRKTTELSAENKLLKVQLEATLQQARFRDGCSLNVAYVLTTTKPQEGEEETIDAIRERQKWENDDYICTGHIFNGLCDALFDVYQDSTSAKDLWNKLEARYMQKDATSKKFLVTRFNNYKMINGKSIMDQMHEIEHILNNFKQHDMHMDESIIVSSIIDKLPSSWKDLKKKLKHKKEDISLEQLGNHLRLEEEYRKQDAEKETNVQEKVHMVEEGQSNRTSKKRGKDKDKSQAHDGHKNKKMKARIRNTLVDGCVHLNWSGPEKGLPQDKGRDLVYLGRDPEGRGGQGHDLNLGLIEERDLKADVKRNPLDSCKALRFGSSNRKGFDLNSIGHDLCALIPTSFVLHLFVTLGAGFGCKLSAIIPIFFMLLFVTISWLTCRNPDLSKLRPPVLPSLLTEARM 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3466 567 PANTHER GAG-POL POLYPROTEIN-LIKE PROTEIN 206 404 - -
Sto8g3466 567 MobiDBLite consensus disorder prediction 363 409 - -
Sto8g3466 567 CDD bZIP_plant_RF2 120 168 IPR044759 GO:0003700|GO:0006355
Sto8g3466 567 Pfam gag-polypeptide of LTR copia-type 227 363 - -
Sto8g3466 567 PANTHER PBF68 PROTEIN 206 404 - -
Sto8g3466 567 MobiDBLite consensus disorder prediction 363 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3466 Sto-Chr8 30996010 31007225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3466 23 211 bZIP Transcription Factor Family AT1G43700 37.438 5.15e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3466 - - aip:107633065 261.922