Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3188 ATGGGCTTTATCAGGCGTCTCTTCAGCGCCAGAAAACCCGATCACCCTTCTTCCGGGTCGGATCCTAAACCACCCAAGGACAAGCGCAGATGGAGCTTCGGCAAACCCGGAAAGGACAAGTCTCGCCTCactccaccaccaccaaccgcTCCCCACCACCACTTTGAATCCTCCACCTTCTTGACGGGCTCTCTGGACGCCAACAAGCATGCCATAGCCGTGGCGGCGGCGACGGCCGCCGTCGCGGAGGCCGCACTCGCCGCTGCCCACGCCGCAGCAGAGGTTGTGAGACTCACCAATGGTGGCGCCGGAACCTCCGCCGGAGGCGTCACTCGGCCGGCGAATGGTGGGACGCTCGGTAGCGCCAGCCGACGCCGGTGGGTGGAGGAAGTGGCCGCCGTGAAATTACAGTCTGCCTTCCGTGCTTATCTGACGAAATATGGCAATGTCTCCTCTGTGGAGTTTGAATATGCGAGAGAAGTGAGAACACATTGGTCAAAAGAGGAATATGCAAGGAGAGCTCTGCGAGCACTGAAGGCATTGGTGAAGCTGCAAGCACTGGTGAGAGGCCACATTGTAAGAAAGCAAACTGCAGACATGCTCAGGCGCATGCAAACATTGGTCCGACTGCAGGCCCGGGCACGTGCCAGTCGTGTGAACTTTTCAGATCATTCCTCCAAGTCTTCACTATTTTTCCATCCTgTCCCTGAAGATTATGAGCACCCTCTTCGTGCCTATGGTACGAAATTTGAAGGATCTTCAATTCTGAAGAGATGCAGCTCCAATGCAATCTTCAGGGACGTGGACCCAGCAGAAAGGTCACGTTTTGGCTCGCAGTGGTTAGACCGATGGATGGAGGAAAGCGTTTGGAGCCATCAGGCAAGAGATGGCTCACTGAAACATGTGCACACTAGTTATAGTACCGATGATGATCACAAGAGTGACAAGATTCTTGAAGTTGACACATGGAAGCCACACTTGATCTCTCACCCAACAACTACGTCCTCCTTCCACCACTTacctcaccaccaccaccaccagaaGGACATGTTATATGATTCTCCATCAAAAAGGTCCTCAAAACCTCTAAACCAAACcataccatcatcatcatcatccctgAGCTCGCTCAAGTTCCACAAAGGGAAAGAAGTAGCAGCTTCCAGAACTGCAGAGAACAGCCCACAAGCTCACTCTGCATCATCTAGACATGGAAGTGGTGGTAGGAGAGGGCCTTTCACACCCACAAGAAGTGAGTGTTCTTGGGGCTTCTTTGGAGGGTACACAGGGCACCCCAATTACATGGCCAACACTGAATCATCAAGGGCTAAGGTTAGATCACAGAGTGCTCCGAGGCAAAGGTTGGAGTTTGAGAGGTATGGTTCAAGTGGGAGGTATGTTCAAGGGCTTTGGGATATTCCAGCTGATGAGAGGGATGGGGATTTCAGGGTCAGAGGCTACCCTGCTGTTTCGAGCCGCTTGAACAGGGTTGGGAGTAGCAATTTAAGTTAA 1512 0.5026 MGFIRRLFSARKPDHPSSGSDPKPPKDKRRWSFGKPGKDKSRLTPPPPTAPHHHFESSTFLTGSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGAGTSAGGVTRPANGGTLGSASRRRWVEEVAAVKLQSAFRAYLTKYGNVSSVEFEYAREVRTHWSKEEYARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRVNFSDHSSKSSLFFHPVPEDYEHPLRAYGTKFEGSSILKRCSSNAIFRDVDPAERSRFGSQWLDRWMEESVWSHQARDGSLKHVHTSYSTDDDHKSDKILEVDTWKPHLISHPTTTSSFHHLPHHHHHQKDMLYDSPSKRSSKPLNQTIPSSSSSLSSLKFHKGKEVAASRTAENSPQAHSASSRHGSGGRRGPFTPTRSECSWGFFGGYTGHPNYMANTESSRAKVRSQSAPRQRLEFERYGSSGRYVQGLWDIPADERDGDFRVRGYPAVSSRLNRVGSSNLS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3188 503 MobiDBLite consensus disorder prediction 1 56 - -
Sto8g3188 503 ProSiteProfiles IQ motif profile. 129 158 IPR000048 GO:0005515
Sto8g3188 503 PANTHER IQ-DOMAIN 5-RELATED 1 501 - -
Sto8g3188 503 MobiDBLite consensus disorder prediction 389 403 - -
Sto8g3188 503 MobiDBLite consensus disorder prediction 357 378 - -
Sto8g3188 503 MobiDBLite consensus disorder prediction 102 121 - -
Sto8g3188 503 MobiDBLite consensus disorder prediction 8 37 - -
Sto8g3188 503 ProSiteProfiles IQ motif profile. 179 206 IPR000048 GO:0005515
Sto8g3188 503 Pfam Protein of unknown function (DUF4005) 394 455 IPR025064 -
Sto8g3188 503 Pfam IQ calmodulin-binding motif 179 196 IPR000048 GO:0005515
Sto8g3188 503 Pfam IQ calmodulin-binding motif 132 145 IPR000048 GO:0005515
Sto8g3188 503 PANTHER CALMODULIN-BINDING PROTEIN 1 501 - -
Sto8g3188 503 MobiDBLite consensus disorder prediction 334 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3188 Sto-Chr8 26030830 26038289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3188 1 471 IQD Protein Family AT5G62070 41.996 7.21e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3188 - - pvu:PHAVU_004G120200g 437.573