Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3174 ATGGAAGGTGGAGAAGGTCCCCCATTTCCCGTTGGCCAGCACCAATATGAAAACCCTTCAGATTTCAATAGCTTGCCGGTGGAGATCCCTGCAACTCAAAACCAAGATGTTGATGCAACCAACGCCGGCATCAACGAGGAGCAACCAGCTCCTCATGCAGCTAAAGAACGATGTCAGCAAGATTGTCGTATAACTGTAACACCAGATGACATGCTTTGGGCAGTTAGGAATCTAGGCTTCAATGACTATTTGGAGCCTCTTACCACCTTTCTCAGTCGCCTTCGTGACGTCGAAGGTGAACATTATACTGCATAA 315 0.4762 MEGGEGPPFPVGQHQYENPSDFNSLPVEIPATQNQDVDATNAGINEEQPAPHAAKERCQQDCRITVTPDDMLWAVRNLGFNDYLEPLTTFLSRLRDVEGEHYTA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3174 104 MobiDBLite consensus disorder prediction 1 27 - -
Sto8g3174 104 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 54 99 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto8g3174 104 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 54 99 - -
Sto8g3174 104 SUPERFAMILY Histone-fold 53 99 IPR009072 GO:0046982
Sto8g3174 104 Gene3D Histone, subunit A 33 103 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3174 Sto-Chr8 25736697 25751056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3174 54 100 CCAAT-HAP3 Transcription Factor Family AT5G47670 57.447 2.52e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3174 K08065 - mus:103977352 68.5514