Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3163 ATGGATGGGGTTGATAACGACTTGGTTAGTGCACATGAAGAGAATGTTAAAGTCAGACCTGAGACATCAAATAATTTGGACTTGAATGTTGAGCAGAACTGTTGCAGCCCAAAAGTTATGCATGTTAACAGTATTCAATCCAATCAATCTTCAGCAATCAAACCTAGTACCAATTGTGTACTAGGAATAGGTACAGAATTTGAATCTGATGAACATGCATACAGATTCTATAACAAATATGCCAGATTGCTGGGTTTCAGTGTTAGAAAAGACTGGGTAAATAGGAGTAAAGTACATGGTCTGGTGGTGTCTAGGAAGTTTACTTGCTCCAAAGAGGGATACCGTAGGAAAGACAAAAGAGATGTTAATGTGAAGAAACATCGGAAGGAAACAAGAACTGGTTGCTTGGCACATATGATCATCACTCGTCAATCAGATGGTAAGTACTGGGTAACCCATTTTGAAGCACAGCACAATCATGATAATATAAGTCCCAGTAATGCTCACATGTTAACATTGCAAAATGAACTATGTGCTGCCCAAGCTGTGGAAGCTGAGTCAAAAAATACTTTGGGATTGAAATCAAATACAGCATTAGAAATGGTAAATAGAAAATTAGGTGCTCGTGAGTCTTTTGACCAAGTTTCTTTGGATCATGACAATCATCTTCATACAGAAAGGGATAGAGATATGAATGAAGGAGAGGCAGGGCGCTTGTTGGGTTACTTTCAAAGAAAACACTTTGAAAATCCCACATTTTTTTATTCCATACAGCTAGATGTTGATGACAAAGTAAGCAATATATTTTGGGCTGATGACAATATGGTAGTAGATTATGATTATTTTGGTGATATCATTTGTTTGGACACAACTTGCAGAGCAAACAGAGAATTTCGACCATTTTTACAATTTATAGGTGTTAATCATCACAAGCAAGTGGTAAACTTTGCTGCAGCTCTTCTGTACGATGATACCATTGAATCATTTAATTGGTTATTTCGCACTTTTATTAATGCTATGTCTGGAAAAAAGCCAAAGGCCATTCTCACAGAACAAGATGCTGTAATTATTGAAGCAGTCAATACAGTTTTGCCTGAAACTGACCATCGTATTTGTGTATGGCAGATGTTTGAAAACACTTTAAAACACCTCAGCCATGTTGTTAAGGATGGTAATTCTTTTGCCAATGATCTGCGGAGCAGTATTTATGACCACAAATATGAGGAGGACTTTGCTCATGCTTGGGAGGCTATGCTGGAGAAGTATGGTCTCCAGCAAAATGAATGGCTGAGATGGATGTaccgagaaagagagaaatgggCTGTTGTCTTTGGTCGAAATTCATTTCTTTTAGATATAAAAGGCTTCCATTTAGGAGAGGTTTTCTCTCATAAATTTAGAAGTTATTTAAATTCTGACCTTGATGTCCTTCAATTTCTTAAGCATTTTGAAAGGGTTGTGGATGAGCAACGTTATGAAGAAATAGAAGCAACCGATGAAATGAGCAGATGTTTGCCAAGATTAATGGGTAATGTCATTTTGTTAAAGCATGGATGTGACATTTATACTCCTAGGGCATTTGAAGTATTTCAGCGAGGATATGAGGAGTCCTTAAATGTTGTTGTCAACCAAAACAGTAGAAATGGACCACTGTTTGAGTATAAAGCAAATACATTTGGCCATACTAGACAGTATATTGTCACATTCAATTCTTCAGATGATACAGTTGTGTGCAGTTGTATGAAGTTTGAGAATGTTGGATTTTTGTGTAGCCATGCACATAAAGTGCTCGACAACAGGAACATAAAAGTGGTTCCATCTCGGTACATCTTGAAGAGATGGACTAAAGAAGCAAGATTGGGAAGTGTCAGGGAGATTGGGCAATGTAACATGCAAGATAACCCTAAGATGATTGTAGCCTGTCGTTACAAACATTTGTGCCATAGACTGCTCAAGTTTTCAGCAAGGGCCTCTGAATCTGAGGAAGCTTATCAATTTTCCATGAGGAAACTTGAAGAGATGATGGAAGGAGTGGAGAAAATCCTGACATTGAAAGATGTGGAAGCTCAAGTTATCTCCTCCAGTAGTACTGATGCAAATGCTTCAGAAAATGAACCTGCAGACATCTTTCTCAATGGACAAGCGATGGAGGAGCAGGATGAAAGTAATAGACTAAATGAAGAAAAAGGGGGGAGATGCACACCTGATAGGAGCCATCAAAAAACTATGCATTGTAATGGATCAAATTCGGACAGGGTCCTGAATGTGGATGTATCACCACCAAATACTGTTGTTTGCATCTCGAGTCCATCATCTGCATATGTTTCATCTCAATCTACACCGCCAAATCCCATTATTCAGGGACTGTACAATTTTGAAGCCAATCAAGTGGTTCAGTGCATGTATGAACAGCCCAATGTTACGCTGGACCACCAATCAAATGAAAGCATGTACCCGCCACCAAACTTCTTTTCTAACCAACAGGATTCTCCTGGCCAATCTCAGCTATTGCAGCCTATAATCCAAAGCGCTTACCAAGAGACCATTCCGAGCACTAATCAAATGAGACAGGCAATGGATCATGAGCTCCAAAATTCACATTCATCTTCATTCTTACTGTATGATCATAGATACAGAACTTCTGACACTGGATAA 2655 0.3834 MDGVDNDLVSAHEENVKVRPETSNNLDLNVEQNCCSPKVMHVNSIQSNQSSAIKPSTNCVLGIGTEFESDEHAYRFYNKYARLLGFSVRKDWVNRSKVHGLVVSRKFTCSKEGYRRKDKRDVNVKKHRKETRTGCLAHMIITRQSDGKYWVTHFEAQHNHDNISPSNAHMLTLQNELCAAQAVEAESKNTLGLKSNTALEMVNRKLGARESFDQVSLDHDNHLHTERDRDMNEGEAGRLLGYFQRKHFENPTFFYSIQLDVDDKVSNIFWADDNMVVDYDYFGDIICLDTTCRANREFRPFLQFIGVNHHKQVVNFAAALLYDDTIESFNWLFRTFINAMSGKKPKAILTEQDAVIIEAVNTVLPETDHRICVWQMFENTLKHLSHVVKDGNSFANDLRSSIYDHKYEEDFAHAWEAMLEKYGLQQNEWLRWMYREREKWAVVFGRNSFLLDIKGFHLGEVFSHKFRSYLNSDLDVLQFLKHFERVVDEQRYEEIEATDEMSRCLPRLMGNVILLKHGCDIYTPRAFEVFQRGYEESLNVVVNQNSRNGPLFEYKANTFGHTRQYIVTFNSSDDTVVCSCMKFENVGFLCSHAHKVLDNRNIKVVPSRYILKRWTKEARLGSVREIGQCNMQDNPKMIVACRYKHLCHRLLKFSARASESEEAYQFSMRKLEEMMEGVEKILTLKDVEAQVISSSSTDANASENEPADIFLNGQAMEEQDESNRLNEEKGGRCTPDRSHQKTMHCNGSNSDRVLNVDVSPPNTVVCISSPSSAYVSSQSTPPNPIIQGLYNFEANQVVQCMYEQPNVTLDHQSNESMYPPPNFFSNQQDSPGQSQLLQPIIQSAYQETIPSTNQMRQAMDHELQNSHSSSFLLYDHRYRTSDTG 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3163 884 Pfam MULE transposase domain 285 378 IPR018289 -
Sto8g3163 884 MobiDBLite consensus disorder prediction 720 739 - -
Sto8g3163 884 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
Sto8g3163 884 MobiDBLite consensus disorder prediction 717 754 - -
Sto8g3163 884 ProSiteProfiles Zinc finger SWIM-type profile. 565 601 IPR007527 GO:0008270
Sto8g3163 884 SMART 26again6 576 603 IPR006564 GO:0008270
Sto8g3163 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 10 746 - -
Sto8g3163 884 MobiDBLite consensus disorder prediction 740 754 - -
Sto8g3163 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 746 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3163 Sto-Chr8 25585284 25588298 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto8g3163 MULE 5.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3163 - K17604 gmx:100809803 1315.44