Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3110 ATGGGAGTGCAGAACCAGGCATTACAAATGTTTTGGCAACAACAATTGTATGAGATACAGAATGCTGAAGCAATTAGGGGCCAAAATCAATTGCCTCTGGCTCGAATCAAGAGAGTCATGAAGTCTGATTCTGATGTAAAGATCATCAGTGCGGAAACTCTAATATTACTATCAAAAGCATGTGAGATGTTCATTCAAGAAATGAGCCTTCGTGCTTGGATGCGAACTGAAGAGAACAAGAGACGTGTTATTCAACGTCATGACGTTGCTGAATCCATTCATGAAAATAAACTCTATGACTTCTTAACAGATGTTATTCCATTGCAATACCAAGGTGGCCATCCATCTCTCGTGCCTCCACCTCAACCTCAACTTCagGAAGAGCATTATGGACAAGCTGTAGAAAATCCTAATTATGCTGCTCCAATTTTTAATGAGAGTGTGATGAATATGGGGATTAATGTGACTgacCAGCAAGCTGAAAGTAGCCATCAGTATACTGAAGCCTTCACCATGGATCCATCCATTGTGCCGTCTCATCCTCAGTTTCCCTACAATTTCCCTCCCCCAAATTAA 576 0.408 MGVQNQALQMFWQQQLYEIQNAEAIRGQNQLPLARIKRVMKSDSDVKIISAETLILLSKACEMFIQEMSLRAWMRTEENKRRVIQRHDVAESIHENKLYDFLTDVIPLQYQGGHPSLVPPPQPQLQEEHYGQAVENPNYAAPIFNESVMNMGINVTDQQAESSHQYTEAFTMDPSIVPSHPQFPYNFPPPN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3110 191 SUPERFAMILY Histone-fold 28 121 IPR009072 GO:0046982
Sto8g3110 191 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 4 165 IPR027170 GO:0003700|GO:0006355|GO:0016602
Sto8g3110 191 Gene3D Histone, subunit A 1 107 IPR009072 GO:0046982
Sto8g3110 191 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 165 - -
Sto8g3110 191 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 90 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3110 Sto-Chr8 24726753 24728288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3110 8 128 CCAAT-HAP5 Transcription Factor Family AT1G56170 46.565 6.10e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto8g3110 CBFD_NFYB_HMF 8.2e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3110 K08066 - mnt:21409721 147.132