Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3091 ATGGAAGGTGGAGAGGGTCCCTCATTTCCCTTTGGCCATCACCAATATAAAAATCCTGCAGAATGTGGATTTTCATATTTAAACATCTTGCCGGTGGAGAtacctacaactcaaatccaagatgttGATGCAACCAACGCCGGCGTCAATGAGGACCAACCAGCTCCTCACGCAGTAGTGCAAGAGCCAATCCATTATAGTCCTCTCACTAACTTGACTAGAATTATGAGGCAGATTCTTCCACAAAACACTAGAATCTCCGAGGATTCCAAACAGACTCTCCATGTTTGTGTCTCGGCGTTTATTCGCTTTCTCACTAATAAGGCTAAATTACAGTATCAGCAAGATTGTTGCATAACTATAACATCAGATGACATGCGTTGGGCAGTTAGGAATCTAGGCTTCAATGACTATGTGGAGCCTCTTACCACCTTTCTCAGCTACCTCCGTGATGTCGAAGGTTGGTTAGAATGCCCAGcgtatgatcaagaaataggaTGCATAATTCTTTCAAAGGTTTACAATGGGGTTTCCCCCACAGCTGCTATGCTTACCTCAGATCAAGGATTGCTTTGTGTGACTGCAAATAGAAACACAAGGCAAAGTTGTACTGTCAAAACCTGTGGCCAGACTCTGAAGTAG 642 0.4112 MEGGEGPSFPFGHHQYKNPAECGFSYLNILPVEIPTTQIQDVDATNAGVNEDQPAPHAVVQEPIHYSPLTNLTRIMRQILPQNTRISEDSKQTLHVCVSAFIRFLTNKAKLQYQQDCCITITSDDMRWAVRNLGFNDYVEPLTTFLSYLRDVEGWLECPAYDQEIGCIILSKVYNGVSPTAAMLTSDQGLLCVTANRNTRQSCTVKTCGQTLK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3091 213 Gene3D Histone, subunit A 61 154 IPR009072 GO:0046982
Sto8g3091 213 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 42 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto8g3091 213 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 42 154 - -
Sto8g3091 213 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 68 130 IPR003958 -
Sto8g3091 213 SUPERFAMILY Histone-fold 68 152 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3091 Sto-Chr8 24211367 24227163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3091 53 154 CCAAT-HAP3 Transcription Factor Family AT4G14540 43.137 7.22e-27 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto8g3091 CBFD_NFYB_HMF 2.4e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3091 K08065 - thj:104811667 106.686