Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g3011 ATGGCAAATGTGAGTGGAGAACGGAAGAGAAAGAGATTTGAGGAGTGCGTCGTTGACTCATCGCCACCGCTGCCGGAGAGGTGCTGGTTCGTCGTTCTTCTCCATTACTGTGCTGGTACGTCGTTCTTCTCCATTTGGTTCACCTCTATTTCTTTTTGGTCACTCCGTTATCCAGCAAGAATTCTACGGAGAGAAGCATGGCGAGAAGAAGTGGAATGCGATAAGTGCTCTAAGCCTTACATCGTTCAGTCAGATTGGAAAGCTCACTCCAAAATTTGCAGCACCAAGGGCAATGTGGGGCTTATTTTCACAAAAGGTGATCTAAAGGAAGTTAGCCAAGAGGTTGGAGCTCCTGCTGTTGGTTTGGTTGTTCCAATTGATGTGGTAGTTCCTCCTGGCAGTACAGGGCTTGATCCATCTCGGGCCTCTTTATTCCAGGTTTGCAATCTTGGTCTGAAAGAACTTGGTTTtcctttttaa 480 0.4625 MANVSGERKRKRFEECVVDSSPPLPERCWFVVLLHYCAGTSFFSIWFTSISFWSLRYPARILRREAWREEVECDKCSKPYIVQSDWKAHSKICSTKGNVGLIFTKGDLKEVSQEVGAPAVGLVVPIDVVVPPGSTGLDPSRASLFQVCNLGLKELGFPF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g3011 159 Gene3D - 64 152 IPR043141 -
Sto8g3011 159 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 95 152 - -
Sto8g3011 159 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 95 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g3011 Sto-Chr8 22690066 22690974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g3011 96 150 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 73.770 1.33e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto8g3011 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g3011 K02941 - oeu:111372935 81.2629