Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2930 ATGGACCTGAAGGCCTCATTGGACCCACAAAGTCGCTACCTTTCTTCCTGGACTCCCTCTGGAAACCCATGTGATGGTTCCTTCGAGGGGCTGGCTTGCAATGAGAATGGTCAGGTGGCTAACATTTCTCTTCAGGGGAAGGGTCTTTCTGGGAAGCTCTCACCCGCCATTGGTGGCCTCAAGCACCTCACTGGACTCTACTTGCATTACAATGCTCTCCATGGGGAGATTCCCAGAGAAATAGCTGATTTGCCTGAGCTCATTTTGCAGCTCTGCTATAATCAGTTGAAGGGAAGCATACCCACTCAGCTTGGTGATTTGAAGAAGCTTAGTGTTCTTGCTCTGCAATCGAATCAACTGACCGGTGCTATACCCGCGAGTTTAGGCGATTTGGGAATGTTGACGAGGCTTGATTTGAGCTCGAACCGCCTTTTCGGTTCCATTCCCACCAGACTAGCCGATGCTTCGTCATTGCAGGTTTTAGACGTTCGCAACAACACTCTCTCTGGAAATGTACCTCCCGTATCAGCAATCGGTATTCTAACCTTTGTGCATTATCGCCGGCGAAAGCAAAAGCTTGGAAACTCCTACGATGTCTCCGATAGCCGGTTGAGTACCGATCAAGCCAAGGGTATGTACAGGAAAAACGGCTCTCCTTTGATCAGTCTTGAGTACTCCAATGGGTGGGACCCTTTGGCCGATAGCCGGAACTTCAACGGCGAAAGCCAAGACGTGTTCCAGAGTTTTCGGTTCAACTTGGAAGAGGTGGAAACCGCGACCcagtacttctcggagtcgaATTTGTTAGGCAAGAGTAACTTCAGCGCAACGTATAAAGGAGTGCTGAGAGATGGATCTGTGGTTGCTGTGAAGAGCATCAGCAAAAGTAGCTGCAAGTCCGACGAAGCCGAGTTCTTGAAGGGATTGAACATCTTGACTTCTCTGAGGAACGAGAATCTAGCGAGGTTGAGAGGGTTTTGCTGTTCAAGGGGACGAGGCGAGTGCTTTTTGGTTTATGATTTCGTTCCGAACGGGAACCTTTCGCGTTACCTCGACGTGAAGGAAGGCGATGGAGAAGTACTTGAATGGACAACCAGAGTTTCTATTGTGAAGGGGATTGCCAAAGGTATAGCATATTTACATGCGCATAAACCGAACAAACCGGCGCTTGTCCACCAAAACATCTCCGCCGAAAAAGTCCTCATCGACCAGCGATTCAACCCGCTGCTCGTGGATTCCGGTCTGTGCAAGATCCTCACTAACGACGTCGTCTTCTCGGCGCTCAAGGCCAGTGCGGCGAGGGGCTATCTCGCCCCGGAATACACCACCACCGGGCGCTTCACCGAGAAGAGTGACGTGTACGCATTCGGAGTGCTCCTTCTCCAAATTCTCTCGGGGAAGCAGAGCGTCACTAGCTCGATGCGCCTCGCGGCCGAGTCCTTCCGGCTCCAAGAATTTATGGACCCAAATCTGCAGGGTAGGTTCTTCGAGTACGAGGCGGCGAAGCTCTCGAAAATGGCCCTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTTGGAAATTGTAGTAGCTGTATGTGA 1608 0.5037 MDLKASLDPQSRYLSSWTPSGNPCDGSFEGLACNENGQVANISLQGKGLSGKLSPAIGGLKHLTGLYLHYNALHGEIPREIADLPELILQLCYNQLKGSIPTQLGDLKKLSVLALQSNQLTGAIPASLGDLGMLTRLDLSSNRLFGSIPTRLADASSLQVLDVRNNTLSGNVPPVSAIGILTFVHYRRRKQKLGNSYDVSDSRLSTDQAKGMYRKNGSPLISLEYSNGWDPLADSRNFNGESQDVFQSFRFNLEEVETATQYFSESNLLGKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLARLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVKEGDGEVLEWTTRVSIVKGIAKGIAYLHAHKPNKPALVHQNISAEKVLIDQRFNPLLVDSGLCKILTNDVVFSALKASAARGYLAPEYTTTGRFTEKSDVYAFGVLLLQILSGKQSVTSSMRLAAESFRLQEFMDPNLQGRFFEYEAAKLSKMALLCSHESPFERPSMEAIVQELGNCSSCM 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2930 535 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Sto8g2930 535 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 175 533 - -
Sto8g2930 535 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 87 - -
Sto8g2930 535 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 174 - -
Sto8g2930 535 SUPERFAMILY L domain-like 8 174 - -
Sto8g2930 535 Pfam Protein tyrosine and serine/threonine kinase 267 528 IPR001245 GO:0004672|GO:0006468
Sto8g2930 535 Pfam Leucine rich repeat 89 144 IPR001611 GO:0005515
Sto8g2930 535 Gene3D Phosphorylase Kinase; domain 1 233 341 - -
Sto8g2930 535 SUPERFAMILY Protein kinase-like (PK-like) 239 528 IPR011009 -
Sto8g2930 535 Gene3D Ribonuclease Inhibitor 1 87 IPR032675 -
Sto8g2930 535 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 175 533 - -
Sto8g2930 535 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 88 174 - -
Sto8g2930 535 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 87 - -
Sto8g2930 535 ProSiteProfiles Protein kinase domain profile. 263 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2930 535 Gene3D Ribonuclease Inhibitor 88 177 IPR032675 -
Sto8g2930 535 Gene3D Transferase(Phosphotransferase) domain 1 342 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2930 Sto-Chr8 21563383 21568832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2930 49 376 Miscellaneous Gene Families AT4G22730 43.570 7.60e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sto8g2930 PK_Tyr_Ser-Thr 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2930 - - csv:101214490 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2602 10 36300811 36303632 Sto8g2930 8 21563383 21568832 CCT