Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2882 ATGGCCACCTCCAGGCGTGTGAGGGCATTCAAGCGATGGATGAAATCCCGGGGGTTTGAATTCAGCGATGCACTGAATTTCGTAGACAGTCCAGAAGATGGAATTTCTGTGAGAGCTTTGTGCCAATTGAAGGAAGGTGAGGTTGTGGCCAGAATACCGAAGGATGCTTGCTTGACCATTAAGACTAGTGGGGCGCGTCAAATGATTGAAGATGCTGGTTTGGATGGCTATTTGGGGCTAGCAGTGGCTCTCATGTATGAGAGAAGCTTGGGCGAGGAGTCACCCTGGGCTGGCTACCTTCAGATCTTGCCCCACCAGGAGTGCCTCCCATTGGTTTGGACTCTGAATGAAGTGAACGAGCTTTTGAGTGGGACTGAGTTGCAGAAGATAGTGCAAGAAGACAAAGCTCTTATCTACGAGGACTGGAAAGAGAATATTCTGCCGATATTGGATTTTGCACCTTCAAATCTTAACCCAAATTTTTTTGCTGTAGAAGAATATTTTGCTGCCAGAAGTCTTATTGCTTCACGTTCTTTTCAGATAGATGATTACCACGGTTTTGGCATGGTTCCCCTGGCCGATCTCTTCAATCATAAAACAGATGCTGAGGATGTGCACTTCACCTCTCTGTCCTCTAACTATGAATCTGATAATGATgttgatgaaaataatgagTGTGTGACTGATGAAGAAGAATTGGCTCAAAAATCTTCTATAGATCATGAGACTGAGATGGATACGGCTTTTTCTGGGAAATCCAGTGGTAGAAACTTGGAGCCTTCTTCAGTTGAAGATGGTGATCCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCATTGGAGCTGAGGTATTTAATACTTACGGGTCAATGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAATCCCTATGATATTGTGAATATTGATTTGGAGCTAGTACTTCAGTGGTGTTCTTCTTTGTTTTCGGGCCGGTACAGTAGAGCTAGAGTCTCTCTTTGGAGAAGGTTGGACTATTCAGCGTGTGACAGCCAAAACTCAGaatattttgagatttcatcTGCTGGAGAACCACAGATTGAACTTCTGATTTTATTATACATTATGTTGTTACCAGATGATGCATACCATAAGTTAGACATTTCTGTATCAGTTGCAGGAAAGATTCATAAATCAAGTGAAACTGCTCTTTCAGATGATTACTATATCTTGTCAAAAGAACCATCTAATGTGAGCAAGGAACGCATGCTGACTAGAAAAGTTTGTGATGCTTTATTGTCTGTTGCTGATATGCGTGAAAGTCTCTATGGTCTGAACTCAATTGAAGATGATTTCAAGGCATTAGAGAGATGTGATAGTGTTAGAGAAAGAAAGTTATTCCACTCTTTAATGCTTCGCATCAGTGAAAGGAATATCCTTAAAAAGCTCAGAAATTACGCTGCACAGCCATTTGAAACTGCCAAACGAAATTCTGCAAGGAAGAAGTTGAAAAGCTCAACAAAGTAA 1524 0.4068 MATSRRVRAFKRWMKSRGFEFSDALNFVDSPEDGISVRALCQLKEGEVVARIPKDACLTIKTSGARQMIEDAGLDGYLGLAVALMYERSLGEESPWAGYLQILPHQECLPLVWTLNEVNELLSGTELQKIVQEDKALIYEDWKENILPILDFAPSNLNPNFFAVEEYFAARSLIASRSFQIDDYHGFGMVPLADLFNHKTDAEDVHFTSLSSNYESDNDVDENNECVTDEEELAQKSSIDHETEMDTAFSGKSSGRNLEPSSVEDGDPSMLEMIMIKDVSIGAEVFNTYGSMGNAALLHRYGFTEQDNPYDIVNIDLELVLQWCSSLFSGRYSRARVSLWRRLDYSACDSQNSEYFEISSAGEPQIELLILLYIMLLPDDAYHKLDISVSVAGKIHKSSETALSDDYYILSKEPSNVSKERMLTRKVCDALLSVADMRESLYGLNSIEDDFKALERCDSVRERKLFHSLMLRISERNILKKLRNYAAQPFETAKRNSARKKLKSSTK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2882 507 PIRSF RMS1_SET 1 489 IPR011383 GO:0016279|GO:0018026
Sto8g2882 507 SUPERFAMILY SET domain 268 308 IPR046341 -
Sto8g2882 507 ProSiteProfiles SET domain profile. 23 290 IPR001214 GO:0005515
Sto8g2882 507 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 10 489 - -
Sto8g2882 507 MobiDBLite consensus disorder prediction 246 266 - -
Sto8g2882 507 Gene3D set domain protein methyltransferase, domain 1 3 303 - -
Sto8g2882 507 CDD SET_LSMT 24 304 - -
Sto8g2882 507 SUPERFAMILY SET domain 4 207 IPR046341 -
Sto8g2882 507 Pfam SET domain 34 290 IPR001214 GO:0005515
Sto8g2882 507 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 10 489 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2882 1 502 NAC Transcription Factor Family AT3G56570 58.769 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto8g2882 SET 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2882 K05302 - vra:106769924 711.835