Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2879 ATGGATGGAGAAAATAATGTGAATGGCAATGATGCGCTTGACATAGAAAATGAAGGTTCATTTGATGGGAGGGACATTGGAAGGTACCCGTCTGAGTTTTCAGAAAGAAACATGACATATACAGAGCCTCTTCTGACGAAGAGGACCAACACCACCTCCCAGATTGCCATAGTTGGTGCCAACCTTTGCCCAATTGAAAGCCTTGACTATGAGatttttgaaaatgaaatatttaagcAGGACTGGCGGTCGAGGAAGAGGATTCAGATTTTTCAGTATTTGACATTGAAGTGGGGATTTGCTCTTCTTATTGGATTAGGTACTGGGCTAGCTGGCTTCTTAAGTAATATTTCGGTTGAGAACATAGCTGGTTTCAAGCTGCTTCTCACAACCAATCTCATGTATAAACACAGATATTTTGAGGCTTTTCTAGCATATGCTGGTATCAATATAGGTTTAGCTGCAGCAGCTGGAGCTCTTTGTGCTTTCATTGCTCCAGCGGCAGCAGGATCTGGTATTCCTGAGGTGAAAGCCTATCTTAATGGTGTGGATGCTCACTCTATACTGGCTCCAAGCACTCTTTTTGTAAAGATTTGTGGTTCCATTCTGGGAGTTTCAGCCGGATTTGTGGTAGGCAAGGAGGGGCCTATGGTACACACTGGTGCATGCATAGCTTCTTTGTTAGGGCAGGGCGGATCTCGCAAGTATCACTTAACTTGGAGTTGGCTAAGGTATTTCAAAAATGATCGAGACCGACGAGACATGATTACTTGTGGTGCTGCAGCTGGTGTAGCTGCAGCCTTTCGTGCTCCAGTGGGTGGCGTTCTCTTTGCTCTTGAAGAGGCAGCTTCATGGTGGCGGAGTGCTCTTCTTTGGAGGACATTTTTCACAACAGCAGTGGTTGCTATTGTTTTGAGAGTCGGAATTCAGTATTGCACCCTTGGAAGATGTGGTCTATTTGGGGAAGGTGGTTTGATAATGTATGATGTCGGCGGAGTCAGAGTAACATACAGTGTTGAAGATATAGTAGGAGTATTACTCCTAGGAGCCATTGGGGGAATTCTTGGAAGCATATATAATTACCTTGTGGATAAGGTTATTCGTATGTATAGCATCATCAATGAAAAAGGTCCAGGTTACAAAATCACTCTTGTGATTGCAATTGCACTTTTGACATCATGCTGTTCTTTTGGCCTACCATGGTTTGCAAAATGCCTCCCCTGTCCCGCTGATTCAACAGTGAGCTGTCCCACTGATCACAAGTCTGGTAACTACAAGAGCTTCCAATGTCCACCGGGCTATTACAACGACCTTGCTTCGCTCTTTCAAACCACTAACGATGATGCTATTCGCAACCTCTTCAGCCCCAGGACAACCAAAGAATTTAACATATCCAGCCTTGTTGTCTTCTTTGCTGCTGTTTACTTCCTTGGCATTTGCACTTACGGTATTGCAATTCCCTCCGGCCTTTTCATTCCTGTGATTCTCGCCGGAGCCGCCTACGGCCGCCTTGCAGGGAGACTATTTGAATCAGTCACCAAACTTGACACAGGGCTCTTTGCACTCCTCGGAGCTGCCTCCTTTCTTGGTGGCACCATGAGAATGACTGTCTCCCTTTGTGTTATTTTGCTTGAGCTCACCAATGATCTCTTGTTACTTCCTCTTGTGATGTTGGTCTTGCTAGTCTCAAAATCAGTGGCTGATAGCTTCAACAAGGGTGTGTACGACCAAATACTGAAGATCAAAGGACTTCCTTATTTGGAGGCCCATGCAGAACCTTACATGAGGAACTTAATTGCACGTGACGTTGTTTCAGGTCCTTTGATCACCTTCTCCGGTATCGAAAGGGTAGGGAATATATTACATGCACTGAGAACTACAGGGCATAATGGGTTTCCGGTCATCGATGAACCGCCCTTCACGGATGCACCGGAGTTGTGTGGGCTTGTACTGAGGTCTCATCTGCTGGTGCTGCTGAAGGGGAAGAACTTCTCAAAAGAAAGAGTGTTTATTAGGCGAAACATGCTGCAAAGAATTTCTGCTTTAGATTTTGCAAAGGCGGGATCAGGGAAAGGAATCAAACTAGAGGATCTAGATATTCTAGAAGAAGAAATGGATATGTACGTTGATCTCCATCCCATAACCAATGCATCACCGTACACGGTGGTTGAGACAATGTCACTTGCTAAAGCTGCTATTCTTTTCCGCCAACTCGGTCTTAGGCACATGTGCGTTGTCCCAAAGAGCCAAACGAGACCTCCTGTTGTTGGGATTCTAACGCGCCATGACTTTATGCCGGAGCATATTTTCGGACTTTACCCTGATATCAAGCCTCACAGGTGGACTGAGTGA 2352 0.4511 MDGENNVNGNDALDIENEGSFDGRDIGRYPSEFSERNMTYTEPLLTKRTNTTSQIAIVGANLCPIESLDYEIFENEIFKQDWRSRKRIQIFQYLTLKWGFALLIGLGTGLAGFLSNISVENIAGFKLLLTTNLMYKHRYFEAFLAYAGINIGLAAAAGALCAFIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKICGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWSWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRVGIQYCTLGRCGLFGEGGLIMYDVGGVRVTYSVEDIVGVLLLGAIGGILGSIYNYLVDKVIRMYSIINEKGPGYKITLVIAIALLTSCCSFGLPWFAKCLPCPADSTVSCPTDHKSGNYKSFQCPPGYYNDLASLFQTTNDDAIRNLFSPRTTKEFNISSLVVFFAAVYFLGICTYGIAIPSGLFIPVILAGAAYGRLAGRLFESVTKLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLVSKSVADSFNKGVYDQILKIKGLPYLEAHAEPYMRNLIARDVVSGPLITFSGIERVGNILHALRTTGHNGFPVIDEPPFTDAPELCGLVLRSHLLVLLKGKNFSKERVFIRRNMLQRISALDFAKAGSGKGIKLEDLDILEEEMDMYVDLHPITNASPYTVVETMSLAKAAILFRQLGLRHMCVVPKSQTRPPVVGILTRHDFMPEHIFGLYPDIKPHRWTE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2879 783 Pfam CBS domain 718 764 IPR000644 -
Sto8g2879 783 Gene3D - 588 769 IPR046342 -
Sto8g2879 783 ProSiteProfiles CBS domain profile. 714 776 IPR000644 -
Sto8g2879 783 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 31 779 - -
Sto8g2879 783 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 31 779 - -
Sto8g2879 783 PRINTS Chloride channel signature 166 183 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 197 216 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 261 280 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 486 506 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 518 534 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 536 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 PRINTS Chloride channel signature 574 588 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 CDD CBS_pair_voltage-gated_CLC_euk_bac 599 767 - -
Sto8g2879 783 CDD ClC_6_like 66 587 - -
Sto8g2879 783 MobiDBLite consensus disorder prediction 1 24 - -
Sto8g2879 783 PRINTS Plant CLC chloride channel signature 71 79 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g2879 783 PRINTS Plant CLC chloride channel signature 282 290 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g2879 783 PRINTS Plant CLC chloride channel signature 296 306 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g2879 783 PRINTS Plant CLC chloride channel signature 314 321 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g2879 783 PRINTS Plant CLC chloride channel signature 438 454 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto8g2879 783 Pfam Voltage gated chloride channel 154 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto8g2879 783 Gene3D Clc chloride channel 89 587 - -
Sto8g2879 783 SUPERFAMILY CBS-domain pair 591 765 IPR046342 -
Sto8g2879 783 SUPERFAMILY Clc chloride channel 75 590 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2879 Sto-Chr8 21039796 21049730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2879 11 778 Ion Channels AT5G49890 72.208 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2879 K05016 - jre:108982434 1179.85