Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2875 TTGCTCGTGTCTCCTGTTCGTCCTCGCGCCTCCTCCTCTTTTGCTGCTTCACAGCTCCGGCGACCTCTCTACCGACGCCGTCGTTCTCTCCGCCGTGCTCTTTCCTCGACGTTGCTCGAGggaATCCATGTCCCCATAggacaatctttttttttttttttctttttcggaACAGAATGTCTGAGTGGAAACTTGGCGCCAAGTCATAGCTGCAGTGCTTGGAGGTTGGAAGGTCACCCATATTTCAGTTCATCAAGTCCGTTACGTGGGTCAAAAAATTTCAATCATCTCAACATGGCAACTAGGCTTATGTTTGAGAATTCTTGTGAAGTtggagtgttttcaaaactgaCAAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTCTACAGTGCATTTGAGACTGAGTTAGCAGATGTTATTCCTGTGGTGAAAACCTCCATTGCTGGAACTCGTATTATTGGCCGCCTTTGTGCTGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGCATAGAAGAAAGATTATCTGCTCTAGGAAACTGTATAGCGTGTAATGACCATGTGGCCCTCACACACACTGATCTTGACAGGGAAACTGAGGAGATGATTGCGGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACCATTGCTGGTAATATTCTTGTCGGAAGTTACTGCGCCTTCTCCAACAGAGGTGGCTTGGTCCACCCACACACCTCCATTGAAGACTTGGATGAGCTTTCTACACTTCTCCAGGTTCCATTGGTGGCTGGGACTGTGAATCGTGGTAGTGAAGTTATAGCTGCTGGCATGACAGTTAATGACTGGACAGCCTTTTGTGGTTCAGACACCACAGCAACAGAACTGTCTGTGGTTGAGAGTGTTTTCAAGCTTAGAGAAGCACAACCTAGTGCCATTGTGGACGAGATGAGGAAATCTCTTATTGATAGCTACGTCTGA 987 0.4417 LLVSPVRPRASSSFAASQLRRPLYRRRRSLRRALSSTLLEGIHVPIGQSFFFFFFFGTECLSGNLAPSHSCSAWRLEGHPYFSSSSPLRGSKNFNHLNMATRLMFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFETELADVIPVVKTSIAGTRIIGRLCAELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVVESVFKLREAQPSAIVDEMRKSLIDSYV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2875 328 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 99 328 IPR002769 GO:0042256|GO:0043022
Sto8g2875 328 Hamap Translation initiation factor 6 [eif6]. 88 328 IPR002769 GO:0042256|GO:0043022
Sto8g2875 328 Pfam eIF-6 family 102 286 IPR002769 GO:0042256|GO:0043022
Sto8g2875 328 SMART eIF6neu2 101 287 IPR002769 GO:0042256|GO:0043022
Sto8g2875 328 Gene3D - 99 308 - -
Sto8g2875 328 SUPERFAMILY Pentein 99 307 - -
Sto8g2875 328 TIGRFAM eIF-6: putative translation initiation factor eIF-6 102 307 IPR002769 GO:0042256|GO:0043022
Sto8g2875 328 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 99 328 - -
Sto8g2875 328 CDD IF6 100 306 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2875 Sto-Chr8 21000344 21005078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2875 99 328 Eukaryotic Initiation Factors Gene Family AT3G55620 85.306 5.10e-155 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2875 K03264 - jre:108979950 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2653 10 36796521 36799512 Sto8g2875 8 21000344 21005078 CCT