Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto8g2861 | ATGGCCTTTGATGGATGTTGCCCCGACTGTAAACATCCAGGGGATGACTGCCCATTGATTTGGGGTGCATGCAATCATGCTTTTCATTTGCACTGTATCCTGAAATGGGTGAATTCTCAGACTTCACAAGCACAGTGCCCAATGTGCCGTGGGGAATGGCAGTTTAAAGGATAG | 174 | 0.477 | MAFDGCCPDCKHPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAQCPMCRGEWQFKG | 57 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto8g2861 | 57 | Pfam | Anaphase-promoting complex subunit 11 RING-H2 finger | 1 | 56 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
| Sto8g2861 | 57 | PANTHER | RING BOX | 1 | 56 | - | - | |
| Sto8g2861 | 57 | PANTHER | ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 | 1 | 56 | - | - | |
| Sto8g2861 | 57 | CDD | RING-H2_APC11 | 1 | 55 | IPR024991 | GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602 | |
| Sto8g2861 | 57 | ProSiteProfiles | Zinc finger RING-type profile. | 7 | 50 | IPR001841 | - | |
| Sto8g2861 | 57 | SUPERFAMILY | RING/U-box | 2 | 56 | - | - | |
| Sto8g2861 | 57 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 57 | IPR013083 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto8g2861 | Sto-Chr8 | 20878015 | 20882170 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto8g2861 | 7 | 51 | C3H Transcription Factor Family | AT1G72220 | 40.426 | 1.23e-06 | 41.2 |