Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2857 ATGGAGAGAAAGGCCTGGGCTTCAGCTGTTATCTGGTTGCTCTTGGTGGTTCATCCGGTATGGCTGATTTCTGCTAACATGGAAGGTTTCTTTTCCCTTCGGCGTGTGGTTCCTTCGAAATGTTCTATGTATAGAGGAAAATTGCTAGAAGTGATCAGGTGGAGTATAAGATTTGTAAGAAGTCCTGGGAGATATTCCATCTGTATCGTGTACCACGCTTTTCATCGCAATAGTATTATGAGGGTTTATCTTGAGAACATTGGGAGACAATGTCTTGCTGCTGGATACCCTATCAGATGCTCTGGATATAGTTTATGCATTGCGCAATGTGATGCTTTACATAGCCTGAGGACAAATTTGCAGGATCCTAACAATGTTTTGCAAAGTTGGGATCCTACGCTTGTGAATCCATGCACATGGTTTCATGTAACATGCAACAATGATAATAGTGTAATAAGAGTTGATCTAGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCCCAGCTAGGCCAGCTGAAGAACTTGCAGTACTTGGAGCTCTACAGTAATAACATTACTGGCCCAATTCCAAGTGACCTGGGTAATCTTACTAGCTTGGTGAGCTTGGATCTGTACTTAAACAGCTTCACTGGTCCTATCCCAGATTCATTGGGAAAGTTGTCAAAATTGCGTTTCCTGACTGCCTTCCTGAAAAATGTTTTCACAAGGGGAAAAGAAAATCATGTGGGAGATCTAATACTGTTTCCCCAATATGTCTATGATAGCCGGCTTAACAACAACAGTCTGACGGGTCCAATTCCTATGTCATTGACCAATATTTCAGCTCTTCAAGTTCTGGATTTATCAAATAACCGTCTCTCTGGTGTGGTTCCTGATAATGGCTCCTTCTCATTATTTACTCCAATCAGTTTTGCTAACAATTTGGATTTATGTGGGCCAGTCACTGGGCATCCTTGTCCAGGCTCTCCTCCattttctcctcctcctccttttgtCCCACCACCTCCAATTTCTGTCCCAGGAGGTAATAGTGCCACAGGGGCTATCGCTGGTGGAGTTGCTGCTGGTGCTGCACTATTATTTGCTGCTCCTGCAATTGCGTTTGCGTGGTGGCGTCGAAGGAAACCACAAGAGTTTTTCTTTGATGTTCCTGCTGAAGAGGATCCTGAAGTCCATCTAGGGCAGCTTAAGAGGTTCTCTCTACGTGAACTGCAAGTTGCTACAGATAGTTTTAGCAATAAGAATATTCTGGGAAGGGGTGGATTTGGTAAGGTATACAAAGGACGCTTGGCAGATGGCTCGTTGGTTGCTGTTAAAAGACTGAAAGAGGAGCGCACGCCTGGTGGTGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTGCATCGAAATCTTCTCCGTTTACGTGGGTTCTGTATGACACCAACTGAAAGGCTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCATCATGCTTAAGAGaGCGGCCAGCACATCAACCGCCTCTAGATTGGCCAACAAGAAAGCAAATTGCTTTGGGATCTGCCAGGGGACTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTAAAAGCGGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTCGTTGGGGACTTTGGGTTGGCGAAGCTTATGGACTACAAGGATACCCATGTCACAACTGCTGTACGGGGCACGATTGGGCACATAGCCCCAGAATACCTATCAACTGGGAAATCATCGGAGAAAACGGATGTGTTTGGGTATGGTATCATGCTTCTGGAGCTCATAACTGGACAAAGAGCTTTTGACCTTGCTCGGCTTGCAAATGATGACGATGTCATGTTACTTGATTGGATCATCATTAATTGTCTAAGGATGGGTGCAAGAAGAGGGAGCATGGCATTGCCCTCTTGTGCTCTTGATATGGTAAAAGGACTCCTGAAAGAGAAAAAGTTAGAAATGCTGGTTGATCCCGATCTACACAACAACTACGTAGAAGCTGAGGTAGAACAGCTTATCCAAGTTGCATTGCTCTGCACACAAGGGTCTCCTATGGACCGGCCTAAGATGTCAGAGGTGGTGAGAATGCTCGAGGGCGATGGCTTGGCGGAGAGATGGGACGAGTGGCAAAAGGTGGAAGTTCTACGCCAAGAAGTCGAGCTGGCCCCTCATCCCAATTCTGATTGGATAGTTGACTCAACTGAAAACTTACATGCTGTTGAATTGGGCTGCTTTGCCGAGTTGCAATTTGTATCATCTTGTGCAGTTTGGTGA 2310 0.4468 MERKAWASAVIWLLLVVHPVWLISANMEGFFSLRRVVPSKCSMYRGKLLEVIRWSIRFVRSPGRYSICIVYHAFHRNSIMRVYLENIGRQCLAAGYPIRCSGYSLCIAQCDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDSLGKLSKLRFLTAFLKNVFTRGKENHVGDLILFPQYVYDSRLNNNSLTGPIPMSLTNISALQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPAHQPPLDWPTRKQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWIIINCLRMGARRGSMALPSCALDMVKGLLKEKKLEMLVDPDLHNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELGCFAELQFVSSCAVW 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2857 769 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 108 227 - -
Sto8g2857 769 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 256 631 - -
Sto8g2857 769 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 651 754 - -
Sto8g2857 769 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 651 754 IPR031048 GO:0004675|GO:0005102|GO:0006468
Sto8g2857 769 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 108 227 IPR031048 GO:0004675|GO:0005102|GO:0006468
Sto8g2857 769 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 256 631 IPR031048 GO:0004675|GO:0005102|GO:0006468
Sto8g2857 769 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Sto8g2857 769 Gene3D Phosphorylase Kinase; domain 1 380 487 - -
Sto8g2857 769 Pfam Protein kinase domain 412 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2857 769 Gene3D Ribonuclease Inhibitor 108 320 IPR032675 -
Sto8g2857 769 SMART serkin_6 411 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2857 769 SUPERFAMILY Protein kinase-like (PK-like) 390 710 IPR011009 -
Sto8g2857 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Sto8g2857 769 ProSiteProfiles Protein kinase domain profile. 411 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2857 769 Pfam Leucine rich repeat N-terminal domain 109 146 IPR013210 -
Sto8g2857 769 SUPERFAMILY L domain-like 109 299 - -
Sto8g2857 769 Gene3D Transferase(Phosphotransferase) domain 1 488 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2857 Sto-Chr8 20801775 20808786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2857 109 754 Receptor kinase-like Gene Family AT1G34210 85.294 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto8g2857 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2857 K13418 - gmx:100789884 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2857 8 20801775 20808786 Sto8g2857 8 20801775 20808786 ECH