Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2853 ATGGCACTAATGAGAAATGGTGCACAATATTTTTACCCAACGTCACCCCCCAAATTCCTAACCCTAACTCTAACCCTCGTTCTCCTTACATGTCAATCTCTCGTTCCACCCATTTTGGCTTCCGACTCCGAATTGCTCATCAAGTTCAAATCCTCCCTCACCAACGCCGACGCCTTATCGAATTGGAACCCGTCGACTCCTCCTTGTAACGGCAACAACGCCAATTGGGTCGGTCTCTTATGTGCATCGGACAAAATCTGGGGCTTGAAGCTTGAGAAAATGGAGCTAAAGGGTGTGATCGATGTGGAATCCCTCACGGGCTTACCGGATCTACGAACTATAAGTTTGATGCATAACAATTTCGATTCGAATTGGCCCGAGTTCAACAAGCTCATTGCGCTCAAGGCTCTTTATCTGTCAAATAATAACTTCACGGGGAGTATTCCGGATGAGGCGTTCCAAAATATGGAGTGGCTTAAGAAAATTCATGTGTCGAATAATCAGTTCACAGGTGAGATCCCGATGTCATTGACCACTTTGCCTAAGCTTAAGGAGTTGAAGTTTGACGGAAACAAGTTTGAAGGCGCGATTCCTGATTTCAAACAGCCTACTCTCACCGTTTTTAACGTCGCTAATAATGCGTTGGTGGGTGAGATACCACCCGCTCTCTCTAAGATATCCTCCGTTTCCTTTTCTGGAAACAGAGCGCTATGTGGAGCCCCACTCGAAGCATGCAAAACCCCGATTTCGGATTCGGATCAGGCTCCGAATCCCAAATCCGGCGCGTCCGTAGGGAGCATCGTAGTGGTGAGCATAGTGGTAGCTCTGGCAGTCATAGTCATCGTAGGAGTCATATTCATCCTTCACCGCCGGAAATCCCCAGCCGGCGGCGCCTGCGTCGAGAACCCATCCTCCTCACCAAACCCCCACAAGAAAAGCAATAGGGACATCGTAGACGACGGCGGGAGCACCCACTCGGTGTCCTCCCACGCGTCGTCCTCGTCCACGCGCCGCGCCGCCGACAGCCTCAAGCTCTCGTTCGTGAGGGACGACAGGGAGAGGTTCGACCTGCACGAGCTGCTCAAGGCGTCGGCGGAGGTTCTGGGAAGCGGCTGCTTCAGTTCGTCCTACAAGGCCGCATTGACCAACGGGATGATGATTGTGGTGAAGAGGTTCAAGCAAATGAATAACGTAGGGAGGGATGAGTTCCATGAGCACATGAGGAGGATCGGTAGGTTGTCGCATCCCAACTTGCTCCCTCTCGTGGCTTACTATTACCGGAAGGAGGAGAAGCTCTTGGTTACCGACTATGTTAAACATGGCAGCTTGGCGGTTCGCCTCCATGgATACCAAGGGTTGGGGCAGCCGAGCCTGGACTGGCCGACGAGGTTGAAGATCGTGAAAGGCATAGCGAAAGGTCTAGAATATCTATACAAGGAGATGCCGAGCCTGATTGCACCGCACGGCCATTTGAAATCCTCCAACGTGCTCCTGGGCGAGTCATTTGTGCCGCTTCTGAACGACTACGGGTTGGTCCCGGTGATAAACCAGGAGCTAGCCCAGGACACAATGGTGATATACAAGTCCCCCGAGTACGTCCAACACGGGAGGGTCACGAAGAGGACCGACGTGTGGAGTCTGGGGATACTGATAGTGGAGATTCTGACTGGCAAGTTCCCGGCCAGCTTCTTGCAGCAAGGCAAAGGGAGCGAGATGGGGTTGGCGAATTGGGTGCACTCTGTGGTGCCGGAGGAGTGGGGTGTGGAGGTGTTTGATAAGGAAATGGGTGGAAGCTTGAGTAGCAGTCAAGGGGAGATGGTGAAGCTCTTGAACATTGCATTGGCTTGTTGTGAAGGGGATGTGGACAAGAGGTTGGATCTCAAGGAGGCCATTGAGAGAATTCAAGGGGTCAAAGACACCGACTAG 1926 0.5223 MALMRNGAQYFYPTSPPKFLTLTLTLVLLTCQSLVPPILASDSELLIKFKSSLTNADALSNWNPSTPPCNGNNANWVGLLCASDKIWGLKLEKMELKGVIDVESLTGLPDLRTISLMHNNFDSNWPEFNKLIALKALYLSNNNFTGSIPDEAFQNMEWLKKIHVSNNQFTGEIPMSLTTLPKLKELKFDGNKFEGAIPDFKQPTLTVFNVANNALVGEIPPALSKISSVSFSGNRALCGAPLEACKTPISDSDQAPNPKSGASVGSIVVVSIVVALAVIVIVGVIFILHRRKSPAGGACVENPSSSPNPHKKSNRDIVDDGGSTHSVSSHASSSSTRRAADSLKLSFVRDDRERFDLHELLKASAEVLGSGCFSSSYKAALTNGMMIVVKRFKQMNNVGRDEFHEHMRRIGRLSHPNLLPLVAYYYRKEEKLLVTDYVKHGSLAVRLHGYQGLGQPSLDWPTRLKIVKGIAKGLEYLYKEMPSLIAPHGHLKSSNVLLGESFVPLLNDYGLVPVINQELAQDTMVIYKSPEYVQHGRVTKRTDVWSLGILIVEILTGKFPASFLQQGKGSEMGLANWVHSVVPEEWGVEVFDKEMGGSLSSSQGEMVKLLNIALACCEGDVDKRLDLKEAIERIQGVKDTD 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2853 641 Gene3D Phosphorylase Kinase; domain 1 326 437 - -
Sto8g2853 641 SUPERFAMILY L domain-like 47 243 - -
Sto8g2853 641 Gene3D Ribonuclease Inhibitor 39 201 IPR032675 -
Sto8g2853 641 Gene3D Ribonuclease Inhibitor 204 245 IPR032675 -
Sto8g2853 641 ProSiteProfiles Protein kinase domain profile. 362 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2853 641 Pfam Leucine rich repeat N-terminal domain 40 81 IPR013210 -
Sto8g2853 641 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Sto8g2853 641 MobiDBLite consensus disorder prediction 295 335 - -
Sto8g2853 641 Gene3D Transferase(Phosphotransferase) domain 1 438 640 - -
Sto8g2853 641 SUPERFAMILY Protein kinase-like (PK-like) 366 634 IPR011009 -
Sto8g2853 641 Pfam Protein tyrosine and serine/threonine kinase 366 631 IPR001245 GO:0004672|GO:0006468
Sto8g2853 641 PANTHER LRR RECEPTOR-LIKE KINASE 22 641 - -
Sto8g2853 641 MobiDBLite consensus disorder prediction 320 335 - -
Sto8g2853 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2853 Sto-Chr8 20770333 20773970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2853 13 641 Receptor kinase-like Gene Family AT5G35390 52.100 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto8g2853 PK_Tyr_Ser-Thr 8.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2853 - - gmx:100804368 745.732