Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2843 ATGGCTCTACCTCTACCAGCAGTTCGATGCCCCAATTCCAGCTTTTCACACCCACCCTCCTCACCTCTTTCTTTTACATTTTCGCCCCATAAATCCTTCTTATTTACGCCTCCTGCCCTCCGCTTCAACCACCGCCCATCTTTCCCCTCTCTCGCCGCAACCCTCTCCGCCTCCGATTCCTTCGCAACCGCCTCCTCTGAAGCTGACAAGAACCTGCTGCTCCATGTCCAGGATTTGAGGGCCAAGATTGTCGAATCCGATGTCGAAATTCTCCACGGTGTTAACCTCGTCATCAACGAAGGAGAGGTTCACGCGATCATGGGAAAGAACGGTTCTGGAAAGAGCACTTTTGCAAAGGTTCTTGTTGGTCATCCAGATTATGAAGTTACAGGAGGGAGCGTTTTATTCAAGGGAGAGAATTTGCTTGATATGGAACCCGAGGAAAGATCACTTGCTGGCCTTTTTATGAGCTTCCAGTCCCCTGTTGAGATCCCTGGCGTTTCTAATGATGAGTTTCTGGTTATGGCTTATAATGCCCGAAGAAGAAAACTTGGCCTGCCTGAGCTTGGTCCACTTGAGTGCTTTTCTTACCTAATGGAGAAACTCAAACTTGTAAACATGAAGCCAGACTTTCTCAATAGAAATGTAAATGAAGGATTTAGTGGTGGTGAACGGAAGCGCAATGAGATTTTGCAGCTCGCGGTTTTGGGGGCAGACTTGGCTATCTTGGATGAAATTGATTCTGGATTGGATGTTGATGCACTGAGAGATGTAGCAAATGCAGTGAACCGGATTATGACCCCAAAAAATTCTCTGTTGATGATAACTCATTATAGACGAATTCTGGATCTCCTAAATCCTACACATGTTCATGTCATGgACAAGGGCAAGATTACAAGGACAGGTGACATATCCATGGTTGAAGTTATTGAGACAGAGGGATATGAAACAGTATCTGCTTAA 963 0.4579 MALPLPAVRCPNSSFSHPPSSPLSFTFSPHKSFLFTPPALRFNHRPSFPSLAATLSASDSFATASSEADKNLLLHVQDLRAKIVESDVEILHGVNLVINEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVLFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVSNDEFLVMAYNARRRKLGLPELGPLECFSYLMEKLKLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNRIMTPKNSLLMITHYRRILDLLNPTHVHVMDKGKITRTGDISMVEVIETEGYETVSA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2843 320 Gene3D - 73 319 IPR027417 -
Sto8g2843 320 Pfam ABC transporter 91 245 IPR003439 GO:0005524
Sto8g2843 320 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Sto8g2843 320 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
Sto8g2843 320 SMART AAA_5 100 297 IPR003593 -
Sto8g2843 320 TIGRFAM sufC: FeS assembly ATPase SufC 74 317 IPR010230 GO:0005524
Sto8g2843 320 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 60 319 IPR010230 GO:0005524
Sto8g2843 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 304 IPR027417 -
Sto8g2843 320 CDD ABC_FeS_Assembly 74 315 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2843 Sto-Chr8 20670553 20672928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2843 87 302 Calmodulin-binding Proteins AT2G36910 26.106 7.76e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2843 K09013 - gmx:100811883 431.409