Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2819 ATGGATTCTGCCTATGAAACTTTGATTCATAAGGTCTCCAAGTTGGATCAAGAACCCGGTATTGGATTGCTTCATCGAAAAATCGATGCTAACTTGAGCAAAAGTGTGAGAGAAGCAATTTCTCTGTCAAGAAATGCACCTGCAGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGACACCTTCTTTTGGGAATCCTCCAAGATGGTTTACATTTGCTGAGCTTCAACTCGCCACGGGTGGATTTTCGCAGGCGAATTTCTTGGCTGAAGGCGGGTTTGGTTCCGTGCACCGTGGTGTCCTGCCTGATGGCCAGGTCATTGCTGTCAAGCAGTATAAGCTGGCCAGTACTCAAGGTGATAAAGAATTTTGCTCGGAAGTTGAAGTCTTAAGCTGCGCACAGCATCGTAACGTCGTGATGCTAATTGGATTTTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATATATCTGCAATGGTTCTCTTGATTCTCATCTTTATGGACGAAACCGTAATGTACTAGAATGGTCTGCTCGGCAGAAGATTGCGGTCGGGGCAGCTCGGGGATTGAGGTACCTTCATGAAGAATGTAGAGTGGGATGCATCGTGCACCGTGATATGCGGCCTAACAATATCCTCCTAACTCATGATTTTGAAGCATTGGTGGGAGATTTCGGACTGGCTAGATGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGGGTGATAGGCACATTCGGGTATTTGGCACCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTGTATTCCTTTGGGGTAGTACTGCTGGAGCTTGTTACCGGATGGAAAGCCGTCGACATAAACCGGCCGAGAGGACAGCAATGCCTCACTGAATGGGCTCGGCCATTGCTGGAAAGAGATGCCATTGATGAACTGGTTGATCCGAGCTTGAAAAACTGCTATATGGATCGGGAAGTTCGCCGAATGATGCAATGTTGCTCCTTGTGTATCCAGCGCGATCCTCATTTTCGGCCTCGAATGTCTCAGGTACTCCGGATGCTGGAAGGAGACATTCTCATGTGA 1080 0.4769 MDSAYETLIHKVSKLDQEPGIGLLHRKIDANLSKSVREAISLSRNAPAGPPPLCSICQHKTPSFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNRNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAVDINRPRGQQCLTEWARPLLERDAIDELVDPSLKNCYMDREVRRMMQCCSLCIQRDPHFRPRMSQVLRMLEGDILM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2819 359 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 3 359 - -
Sto8g2819 359 Pfam Protein tyrosine and serine/threonine kinase 87 353 IPR001245 GO:0004672|GO:0006468
Sto8g2819 359 Gene3D Transferase(Phosphotransferase) domain 1 159 357 - -
Sto8g2819 359 ProSiteProfiles Protein kinase domain profile. 83 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g2819 359 PIRSF ILK 49 357 - -
Sto8g2819 359 SUPERFAMILY Protein kinase-like (PK-like) 62 354 IPR011009 -
Sto8g2819 359 PANTHER OS01G0253100 PROTEIN 3 359 IPR045271 GO:0004714|GO:0006468
Sto8g2819 359 CDD STKc_IRAK 89 355 - -
Sto8g2819 359 ProSitePatterns Tyrosine protein kinases specific active-site signature. 204 216 IPR008266 GO:0004672|GO:0006468
Sto8g2819 359 Gene3D Phosphorylase Kinase; domain 1 55 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2819 Sto-Chr8 20422254 20424049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2819 42 349 Trihelix Transcription Factor Family AT1G68690 50.321 4.49e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sto8g2819 PK_Tyr_Ser-Thr 9.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2819 - - aprc:113855006 662.144