Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2805 CTGTACATGGATTGGGACTGGAAAGAGATTGCATGGGATCCGTACGGGTCGAAGCTATCAAACGACGCCGCTTCAGTGGATTTGAGGCTTGGAGACACTTACGATTCGACGGAGAAATCATTAGCTCATAATAAACCTCGATCGAGAGAGTCGAAATCGGAAGTTTCAGCTTGTGGGTTGTCGAAGCGGAGCCGTACGCAGCAGAACATGTCGTGCTCAGTGGATGGATGTGACTTTGACTTAAGTGATTACAGAGAGTATCATCGGCGGCATAGAGTGTGTGAGAAGAACTCCAAAACTCCGATTGTGTTGGTTGGGGGAAAGCAGCAACGTTTTCTGCCAGCAATGCAAATTGGAGTTTGA 363 0.4793 LYMDWDWKEIAWDPYGSKLSNDAASVDLRLGDTYDSTEKSLAHNKPRSRESKSEVSACGLSKRSRTQQNMSCSVDGCDFDLSDYREYHRRHRVCEKNSKTPIVLVGGKQQRFLPAMQIGV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2805 120 MobiDBLite consensus disorder prediction 37 71 - -
Sto8g2805 120 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 16 112 - -
Sto8g2805 120 MobiDBLite consensus disorder prediction 54 71 - -
Sto8g2805 120 Gene3D - 62 117 IPR036893 GO:0003677|GO:0005634
Sto8g2805 120 SUPERFAMILY SBT domain 70 112 IPR036893 GO:0003677|GO:0005634
Sto8g2805 120 MobiDBLite consensus disorder prediction 37 52 - -
Sto8g2805 120 Pfam SBP domain 72 112 IPR004333 GO:0003677
Sto8g2805 120 ProSiteProfiles Zinc finger SBP-type profile. 69 120 IPR004333 GO:0003677
Sto8g2805 120 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 112 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2805 Sto-Chr8 20336365 20336798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g2805 66 112 SBP-box Gene Family AT5G50670 57.447 5.82e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sto8g2805 SBP 9.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2805 - - lja:Lj1g3v3847150.2 138.272